Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28]
61,434 sequences; 410,872,512 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq56942 107 1e-18
seq4449 105 4e-18
>seq56942
Length=2534
Score = 107 bits (118), Expect = 1e-18
Identities = 168/236 (71%), Gaps = 6/236 (3%)
Strand=Plus/Minus
Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536
|| ||||| | |||||||| ||||| || || || |||||||| ||||| || ||
Sbjct 283 TCACCGCCACGCAGACGCAAAACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCG 224
Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596
|| | ||| || | ||||| || ||||| || || || || | ||| || || || |||
Sbjct 223 GACAATGTGCGTCCATCTTCGAGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGC 164
Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTC-- 34653
|| | ||||| || ||| ||| ||| | ||| || | ||| ||||| || |
Sbjct 163 GGTATACCCTCTTTATCT-TGAATTTTCGCTTTGACATTCTCAATCGTGTC--CGATGGT 107
Query 34654 TCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| ||||||| || ||||| ||||| || | |||||||||||| || ||||| ||
Sbjct 106 TCAACTTCCAGCGTAATCGTCTTACCAGTCAGCGTTTTCACAAAGATTTGCATTTT 51
>seq4449
Length=67262
Score = 105 bits (116), Expect = 4e-18
Identities = 165/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537
|||| || | ||||||||||||||||| | ||| || ||||| || || || || |
Sbjct 64509 CGCCACCACGTAGACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAG 64450
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
| || || || | ||||| || ||||| || |||||||| ||||||||||| || || |
Sbjct 64449 AGAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAG 64390
Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657
| | |||||| ||||| ||||| ||| | | || || || | ||| |
Sbjct 64389 GAATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCAA 64330
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATT 34713
| || | || || ||||| || |||| || || || || |||||||||||| ||
Sbjct 64329 CCTCAAGAGTGATGGTTTTGCCCGTTAGGGTCTTAACGAAGATCTGCATGTTGTTT 64274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314493953490122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |