Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq37138 699 0.0 >seq37138 Length=11844 Score = 699 bits (774), Expect = 0.0 Identities = 1291/1876 (69%), Gaps = 22/1876 (1%) Strand=Plus/Plus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||| | |||||||| |||| | || || |||||||| || | ||| ||||| ||| Sbjct 3563 TTATCAACAGTAAACTGTATTGCATTAGCGGCTGGTTTTGTGCGCAAATAATACATTCCA 3622 Query 76833 GTTTTTAGACCCAGACT-CCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 ||||| || || ||| | ||| |||||||||| || ||| | || ||| | || Sbjct 3623 GTTTTAAGGCC-AGATTTCCAAGCGTAGAAATGAATTGATGTTAACTTTCCATAGTTGGG 3681 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 || || | ||||| || | |||||||||||||| || ||||||||||||||||| || Sbjct 3682 TTCTGCAACGTGAATGTTAAAAGACTGACTTTGATCAATAAAAGCTCCTCTATCAGCTGC 3741 Query 76952 CATTTTTATAATGGTCTTTTGA---GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 |||||| ||| ||| || | | ||||||||||| || ||| | | | || Sbjct 3742 CATTTT---AATTGTCGATTTAACTGAAATTTCCCAAACTGTCTTGTATAAGTCACGAAT 3798 Query 77009 ATCATCTGGAAG-GTTTGTAT--TTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065 | |||| |||| ||| |||| || ||||||| |||||||||| ||| || Sbjct 3799 GGACTTAGGAATAGTTTCTATATTTTGTATAGAACCACGGCTTGATATAATTTGATTTTT 3858 Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125 || | |||| ||| |||| || |||| | |||| || || ||| ||||||| | Sbjct 3859 CATGTTGTCATCCCATAATTCAAGTTCGGTTAGATCTCTGAGAAGGTGATGATTAACAAC 3918 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 ||| ||||| ||||| || || | | ||||| |||||| ||||| ||||| | || Sbjct 3919 TTGGAATTCACCAGATAAAACACGCCTGGTGTATATATTAGAAGTATAAGGTTCAAAGGA 3978 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 |||||| || || | ||||||||| || || || || ||||| || || || | |||| Sbjct 3979 TTCATTATTCCCAAGAATTTGAGCTGTTGATGCTGTAGGCATGGGAGCAACAAGTAAAGA 4038 Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305 ||||| | |||| || ||| | || |||| | ||||||||||| | | || Sbjct 4039 ATTTCGTATGCCATACTTTTGAATTCTCTCCTTTAAAGCATTCCAATCCCACAAGTTTGT 4098 Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA-TCCATT-A 77363 || ||||| ||| | |||||||||| || || || || | | || ||| || | Sbjct 4099 TGGCGTAACATTCCACATGTCGTATTGTAATATGCCTTTGCT--TACAGGACTCCCTTCA 4156 Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 |||| ||||||||| || ||| |||| |||||| || || || |||||||| || Sbjct 4157 TATGATTCATAAGGACCGAACACTTCCGCTAATTCACAGCTTGCCTCTAATGCTCCATAG 4216 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAA 77483 || |||||||| || || | |||| || | ||||| || ||| | |||||| Sbjct 4217 TAGATTGTTTCAAATATTTGTATATTTAGCAAATATGCTTGCTCGCTTTCATATGGATAA 4276 Query 77484 TGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTC 77543 | | || |||| |||||||| || |||||||||||||| || || |||| ||| ||| Sbjct 4277 CGCATCAGTATAAGTGCATCTGCAAAACCCTGAACTCCAATTCCTATGGGTCGATGCCTC 4336 Query 77544 TTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGA 77603 |||| || | || ||||| |||| |||||||||||| || ||||| |||||||| | | Sbjct 4337 ATATTAGATTTCTTGGCTTCAGGAAGAGGATAATAATTTATATCTATGATTTTATTCAAA 4396 Query 77604 TTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC--AAATCTT-CCATCT 77660 ||| | ||| |||| || || || || || ||||||| || ||| | | Sbjct 4397 TTTTTTGTAACAGTTTTAGTTACTTCTTTAAGCTTTTGAAAATCATAAGACTTATTAGCA 4456 Query 77661 ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT-TAGCGTT 77719 || |||||||| | ||| |||||||||||||| ||||| |||| ||||| | ||| | Sbjct 4457 GAAATGAACATGTTAAGAGCAATAGATGCTAGATTGCAAACGGCTATCTCATCTGGCGCT 4516 Query 77720 GGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTG 77779 | ||||| | || || ||||| | ||| || |||||||| || || | ||||| ||| Sbjct 4517 -GAATATTCGACAATTTCAGTACACAAATTGCTGCATTTGATGGTACCAATATTTTTTTG 4575 Query 77780 GTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTG 77839 || || ||| | || || || |||||||| | ||| |||| || || ||||| | || Sbjct 4576 ATTACTTTTTCTGTTACAAGAATCCTTATACAACATATACGGTGTTCCTGTTTCTACTTG 4635 Query 77840 TGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATCATAGATTTGTATCGCCTCT 77898 | ||| || |||| ||| | |||| |||||| || | ||| | || | | Sbjct 4636 GGCTTCAATGATAGCAAACCAAAGTGACT-GAGCTTTAATTTTCCTATTGAAACGGCCTT 4694 Query 77899 CTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAG 77958 || ||||||||| ||||| | ||||||||| ||||||||||| ||||| | || | Sbjct 4695 CTTTTTCATATTTTTCATATAACTCTTCAAATTCTTCTCCCCAAACTTCATCAAGCCCTG 4754 Query 77959 GGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGA 78018 | |||| | || ||||| | ||||||||| ||||| | || ||| |||| || | Sbjct 4755 GACATTTGTGGGGACACATAAGTGACCAGTCGCCATCAGATTCTACGCGTCTCATGAACA 4814 Query 78019 GATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTAT 78078 ||||||| ||||| || || ||||| |||| | ||| ||||| || |||||||||| Sbjct 4815 GATCAGGAATCCAGAGGGCGTAAAATAAGTCTCTTGCTCTGTGTTCCTCTTTTCCTGTAT 4874 Query 78079 TCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCA 78138 | ||||| | || | |||||| | |||||| |||||||| || |||| ||||| || | Sbjct 4875 TTTTTTTTAAGTCTAAAAACTCGAAAATATCCGAATGCCAAGGCTCTAAGTATATAGCAA 4934 Query 78139 TAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTC 78198 | ||||| | ||| || ||||| |||| ||| | || ||||| | || | Sbjct 4935 ACGCACCAGGCCTTTTTCCGCCACCCTGGTCTACATAACGTGCTACATTATTGAACACCC 4994 Query 78199 TCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTG 78258 | ||||| || | | || |||||||| ||||| || || | || | |||| | | Sbjct 4995 TTAACATAGGCACTAAGCCATTAGATGTGCCATTAGTGCCGCATATTGATGTTCCTTTAG 5054 Query 78259 CGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAAC 78318 | |||||| | || ||| || |||||||| || ||||| || | || || Sbjct 5055 CTCGAATACAATGAACATTTATTCCAATTCCTCCCGCTGATTTAGAAATCATTGCACACT 5114 Query 78319 GTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGC 78378 ||| | || | | || || || || || | | ||| |||| | |||||| Sbjct 5115 GTTCAACTGATTTAAAAATTCCTTCAATTGAATCTGCTACCATTGTAAGCAAAAAACAAG 5174 Query 78379 TAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACC 78438 || | ||| | | ||| | || |||||| || ||||| ||||| ||||| Sbjct 5175 ATGATAACTGAGGGCGTCTTGTTGCAGCCGCAAATAAAGTTGGAGAGGCATGGGTAAAAT 5234 Query 78439 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTC 78498 |||| ||||| || | ||||||||||||||| || | || || || ||| |||| Sbjct 5235 ATTTCTCAGAGAGCAAATTGTATGTTTCAATTGCAGCATCGATATCTTCACCATGTATTC 5294 Query 78499 CTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCA 78558 | | || ||| | ||||||||| ||||| ||||| || || ||| || | ||| | Sbjct 5295 CAATCGATACTCTCATCAACATGTGCTGTGGTCTCTCCACAACTTTACCTTTAACTTTAA 5354 Query 78559 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGT 78618 ||| ||||| ||| | ||| ||||| ||||| || |||||| |||||| | || | Sbjct 5355 GCAAATATGAACGTTCAAGAGTCTTAAAGCCAAAGTAATTGTATCCAAAGTCGCGGTCAT 5414 Query 78619 AAATAATAACAGAATT 78634 | || || | ||||| Sbjct 5415 ATATGATTGCCGAATT 5430 Score = 86.0 bits (94), Expect = 9e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 78753 TTTTTTGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 ||||| ||||| || || | |||||||||||||| | ||||||| ||| |||||||| Sbjct 5938 TTTTTGGTTTCTTTATGCAAGTTAGATACAGCTATCCGAGCAGCTAAAATCGCATAATCT 5997 Query 78813 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTT 78872 | ||| | ||| ||| | |||| | ||| || || || ||| |||| | ||| || Sbjct 5998 GCATGATTTGTTGTAAGACTGGCGGATATCTCGGCAGCCAAATTATCGAGTTCTTGGGTC 6057 Query 78873 GTGACCCCATTATATAGTCCTTGAATAACTTT 78904 ||||| || ||| | ||| | |||||| || Sbjct 6058 GTGACACCGCAATACAATCCGTTAATAACCTT 6089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694135346461760