Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq37138 715 0.0 >seq37138 Length=11844 Score = 715 bits (792), Expect = 0.0 Identities = 1276/1847 (69%), Gaps = 24/1847 (1%) Strand=Plus/Plus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACT-CCATCCGTAGAA 75456 ||||||||||| || | ||| ||||| |||||||| || || ||| | ||| ||||||| Sbjct 3593 GCTGGTTTTGTGCGCAAATAATACATTCCAGTTTTAAGGCC-AGATTTCCAAGCGTAGAA 3651 Query 75457 ATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACT 75516 ||| || ||||| || ||| | || || || | ||||| || | |||||||| Sbjct 3652 ATGAATTGATGTTAACTTTCCATAGTTGGGTTCTGCAACGTGAATGTTAAAAGACTGACT 3711 Query 75517 TTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA---GGAAT 75573 |||||| || ||||||||||||||||| |||||||| ||| ||| || | | ||| Sbjct 3712 TTGATCAATAAAAGCTCCTCTATCAGCTGCCATTTT---AATTGTCGATTTAACTGAAAT 3768 Query 75574 TTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAAT 75630 |||||||| || ||| | | | || | |||| | || ||||||| || Sbjct 3769 TTCCCAAACTGTCTTGTATAAGTCACGAATGGACTTAGGAATAGTTTCTATATTTTGTAT 3828 Query 75631 GGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGT 75690 || || | ||||||||| ||| || || | |||| ||| |||| ||||| Sbjct 3829 AGAACCACGGCTTGATATAATTTGATTTTTCATGTTGTCATCCCATAATTCAAGTTCGGT 3888 Query 75691 TAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGT 75750 || | |||| || || ||| ||||||||| ||| ||||| ||||| || || | | || Sbjct 3889 TAGATCTCTGAGAAGGTGATGATTAACAACTTGGAATTCACCAGATAAAACACGCCTGGT 3948 Query 75751 GTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGA 75810 ||| |||||| ||||| ||||| | |||||||| || || | ||||||||| ||||| Sbjct 3949 GTATATATTAGAAGTATAAGGTTCAAAGGATTCATTATTCCCAAGAATTTGAGCTGTTGA 4008 Query 75811 AGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATC 75870 || || ||||| || || || | |||| ||||| | |||| || ||| | || Sbjct 4009 TGCTGTAGGCATGGGAGCAACAAGTAAAGAATTTCGTATGCCATACTTTTGAATTCTCTC 4068 Query 75871 TTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAG 75930 |||| | ||||||||||| | | || ||| ||||| ||| | |||||||||| Sbjct 4069 CTTTAAAGCATTCCAATCCCACAAGTTTGTTGGCGTAACATTCCACATGTCGTATTGTAA 4128 Query 75931 AATTCCGTTGCTAGCATATGA-TCCATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCT 75988 || || ||||| || || ||| || ||||| ||| |||| ||| | ||| ||| Sbjct 4129 TATGCCTTTGCTTACAG--GACTCCCTTCATATGATTCATAAGGACCGAACACTTCCGCT 4186 Query 75989 AGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGA 76048 | ||| || || |||||||| || || || || |||||||| || || | |||| || Sbjct 4187 AATTCACAGCTTGCCTCTAATGCTCCATAGTAGATTGTTTCAAATATTTGTATATTTAGC 4246 Query 76049 TCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCC 76108 | |||| || ||| | |||||| | | || |||| ||||||||| | ||| Sbjct 4247 AAATATGCTTGCTCGCTTTCATATGGATAACGCATCAGTATAAGTGCATCTGCAAAACCC 4306 Query 76109 TGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGG 76168 ||||||||||| || || |||| ||| ||| |||| || | | ||||| |||| ||| Sbjct 4307 TGAACTCCAATTCCTATGGGTCGATGCCTCATATTAGATTTCTTGGCTTCAGGAAGAGGA 4366 Query 76169 TAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTT 76228 |||||||| |||||||| |||||||| | |||| | ||| |||| || || || Sbjct 4367 TAATAATTTATATCTATGATTTTATTCAAATTTTTTGTAACAGTTTTAGTTACTTCTTTA 4426 Query 76229 AGTTTGAGAAAATCAAATTTTCCATCTATCACAAA----CATATTAAGAGCTATAGATGC 76284 || || |||||||| | || || || ||| ||| |||||||| |||||||| Sbjct 4427 AGCTTTTGAAAATCATAAGACTTAT-TAGCAGAAATGAACATGTTAAGAGCAATAGATGC 4485 Query 76285 TAGATTACAAACGGCTACCTCAT-TAGCATTGGCATATTGTATTATCTCCGTGCATAGAT 76343 |||||| |||||||||| ||||| | || || ||||| | || || || || | || Sbjct 4486 TAGATTGCAAACGGCTATCTCATCTGGCGCTGA-ATATTCGACAATTTCAGTACACAAAT 4544 Query 76344 TACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTAT 76403 | || || ||||| || |||| ||||| ||| || || ||| ||||||| || ||||||| Sbjct 4545 TGCTGCATTTGATGGTACCAATATTTTTTTGATTACTTTTTCTGTTACAAGAATCCTTAT 4604 Query 76404 AAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC-GACT 76462 | | | | |||| ||||| ||||| | || | ||| || |||| ||| | |||| Sbjct 4605 ACAACATATACGGTGTTCCTGTTTCTACTTGGGCTTCAATGATAGCAAACCAAAGTGACT 4664 Query 76463 CTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCA 76522 |||||| ||| | ||| | || ||| ||||||||| | ||||||| |||| Sbjct 4665 G-AGCTTTAATTTTCCTATTGAAACGGCCTTCTTTTTCATATTTTTCATATAACTCTTCA 4723 Query 76523 AATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCAC 76582 ||||| ||||||||||| ||||| | || ||||||| | |||||||| | |||||| Sbjct 4724 AATTCTTCTCCCCAAACTTCATCAAGCCCTGGACATTTGTGGGGACACATAAGTGACCAG 4783 Query 76583 TCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 76642 || ||||| | || ||| |||| || |||||||| ||||| || || ||||| Sbjct 4784 TCGCCATCAGATTCTACGCGTCTCATGAACAGATCAGGAATCCAGAGGGCGTAAAATAAG 4843 Query 76643 TCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702 |||| | ||| |||| || ||||||||||| ||||| | |||| ||||| | |||| Sbjct 4844 TCTCTTGCTCTGTGTTCCTCTTTTCCTGTATTTTTTTTTAAGTCTAAAAACTCGAAAATA 4903 Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762 || |||||||| || |||| ||||| || | |||| || | ||| || ||||| Sbjct 4904 TCCGAATGCCAAGGCTCTAAGTATATAGCAAACGCACCAGGCCTTTTTCCGCCACCCTGG 4963 Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822 |||| ||| | || ||||| | || || ||||| || | | ||| |||||||| Sbjct 4964 TCTACATAACGTGCTACATTATTGAACACCCTTAACATAGGCACTAAGCCATTAGATGTG 5023 Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882 ||||| || || | || | |||| || |||||| | || | || || ||| Sbjct 5024 CCATTAGTGCCGCATATTGATGTTCCTTTAGCTCGAATACAATGAACATTTATTCCAATT 5083 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 ||||| || |||||| || | ||||| ||| | || | | | || || || || Sbjct 5084 CCTCCCGCTGATTTAGAAATCATTGCACACTGTTCAACTGATTTAAAAATTCCTTCAATT 5143 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 ||| | | ||| |||| | |||||| || | ||| | | ||| | || Sbjct 5144 GAATCTGCTACCATTGTAAGCAAAAAACAAGATGATAACTGAGGGCGTCTTGTTGCAGCC 5203 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 ||| || || ||||| ||||| || || |||| ||||| || | ||||||||||||| Sbjct 5204 GCAAATAAAGTTGGAGAGGCATGGGTAAAATATTTCTCAGAGAGCAAATTGTATGTTTCA 5263 Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 || | || || ||||| ||| ||||| | | || | ||||||||| ||||| Sbjct 5264 ATTGCAGCATCGATATCTTCACCATGTATTCCAATCGATACTCTCATCAACATGTGCTGT 5323 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182 |||| || ||| ||| || | ||| | ||| ||||| ||| | ||| ||||| Sbjct 5324 GGTCTCTCCACAACTTTACCTTTAACTTTAAGCAAATATGAACGTTCAAGAGTCTTAAAG 5383 Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATT 77229 ||||| || |||||| |||||| | || || || || ||||||| Sbjct 5384 CCAAAGTAATTGTATCCAAAGTCGCGGTCATATATGATTGCCGAATT 5430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712386919850880