Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq56942 116 9e-21 seq4449 104 5e-17 seq10185 102 2e-16 >seq56942 Length=2534 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || ||||| |||||||| |||| || || | |||||||| | Sbjct 260 CAAG-TGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGACAATGTGCGTCCATCTTCGA 202 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || |||||||| || | ||||| || | || || || || || ||||||| Sbjct 201 GCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGGTATACCCTCTTTATCTTGAA 142 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||||| |||| | |||| || || ||||| || ||||| || || | Sbjct 141 TTTTCGCTTTGACATTCTCAATCGTGTCCGATGGTTCAACTTCCAGCGTAATCGTCTTAC 82 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || || ||||| |||| |||||||| Sbjct 81 CAGTCAGCGTTTTCACAAAGATTTGCATTTT 51 >seq4449 Length=67262 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | |||||| ||||||||||| ||||| || | | || | |||||||| || Sbjct 64484 ATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTG 64425 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || || | | ||| || || | | ||||| || || || ||||| || Sbjct 64424 TTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTT 64365 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||||||| | || | | || || ||| || |||||||| || ||||||||||| Sbjct 64364 GGCTTTGACATTTTCGATAGTATCAGAGGGCTCAACCTCAAGAGTGATGGTTTTGCCCGT 64305 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| ||||||| |||||| || Sbjct 64304 TAGGGTCTTAACGAAGATCTGCATGTT 64278 >seq10185 Length=35228 Score = 102 bits (112), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || |||||||| || |||||||| ||||| || || || | ||| || | ||||| Sbjct 2553 GAGCACCAGATGAAGTGTTGACTCTTTCTGGATATTATAGTCAGATAATGTGCGTCCATC 2612 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | || || || || || | | ||||| || | | || ||||| || || Sbjct 2613 TTCCAATTGCTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCTTTATC 2672 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| ||| ||| |||| | | || ||| ||||| || | |||||||| Sbjct 2673 TTGAATTTTAGCTTTTACATTCTCGATAGTATCCGAAGGTTCTACCTCCAAGGTAATAGT 2732 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||| || || ||||| || || |||| |||||||| Sbjct 2733 TTTCCCGGTAAGAGTTTTTACAAAGATTTGCATTTT 2768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152912600966214