Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq4449 181 2e-40 seq56942 156 9e-33 seq10185 145 2e-29 seq34347 109 1e-18 seq4760 96.9 7e-15 seq17053 95.1 3e-14 seq8804 95.1 3e-14 seq6380 95.1 3e-14 seq5820 95.1 3e-14 seq4027 95.1 3e-14 seq2705 95.1 3e-14 seq1453 95.1 3e-14 seq1062 95.1 3e-14 seq340 95.1 3e-14 seq29692 86.0 1e-11 >seq4449 Length=67262 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | |||| ||| || || |||||||||||| |||||||||| Sbjct 64507 CCACCACGTAGACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAG 64448 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || ||||| || ||||| |||||||| ||||| || ||| Sbjct 64447 AGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGA 64388 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| ||||| || ||||| ||||| || | |||||||| || || | || || Sbjct 64387 ATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCAACC 64328 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| || || ||||| | ||||||||||| |||||||| || Sbjct 64327 TCAAGAGTGATGGTTTTGCCCGTTAGGGTCTTAACGAAGATCTGCATGTT 64278 >seq56942 Length=2534 Score = 156 bits (172), Expect = 9e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| |||||||| || | |||| || | ||| ||| ||||| ||||||||||| | Sbjct 281 ACCGCCACGCAGACGCAAAACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGA 222 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| ||||| || || ||||| || || ||||||| |||||| || || ||| Sbjct 221 CAATGTGCGTCCATCTTCGAGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGG 162 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||| || ||||| || || ||||| || | || || |||||||| | ||| || Sbjct 161 TATACCCTCTTTATCTTGAATTTTCGCTTTGACATTCTCAATCGTGTCCGATGGTTCAAC 102 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| || || ||||||||||| |||| || || || || || |||||||| Sbjct 101 TTCCAGCGTAATCGTCTTACCAGTCAGCGTTTTCACAAAGATTTGCATTTT 51 >seq10185 Length=35228 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| | ||| || |||||||| | || ||||| ||||| || ||||||| Sbjct 2539 CCACCACGTAAGCGGAGCACCAGATGAAGTGTTGACTCTTTCTGGATATTATAGTCAGAT 2598 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| ||||| || | ||| || || ||||| ||||||||||| || || ||| Sbjct 2599 AATGTGCGTCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGA 2658 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || || ||||| || || |||||||| | |||||||| ||||||| ||| || Sbjct 2659 ATACCTTCTTTATCTTGAATTTTAGCTTTTACATTCTCGATAGTATCCGAAGGTTCTACC 2718 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | || || || || || || | ||| || || || || |||||||| Sbjct 2719 TCCAAGGTAATAGTTTTCCCGGTAAGAGTTTTTACAAAGATTTGCATTTT 2768 >seq34347 Length=4815 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || |||||||| | |||| || | ||| | || | ||||||||||||| || Sbjct 1790 ACCGCCGCGCAGGCGCAACACCAAGTGGAGTGTGGTCTCGGCTGGGATGTTGTAGTCGGC 1731 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||||| | ||| |||||||| ||||||||||||||||| || Sbjct 1730 CAAGGTGCGGCCATCCTCCATTTGCCGGCCGGCAAAAATCAAACGTTGTTGGTCGGTTGG 1671 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||| ||||||||| || | |||| || ||||| | || || Sbjct 1670 TATGTATTCCTTGCACATGATCTTTGCCTTAATCACCTCGACCGTATCCGATGGCTCAAC 1611 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || | | || | ||||||||||||||| ||||| Sbjct 1610 ATCCAGGGTGATGGTGCGATCGGTGAGAGTCTTAACGAATATTTGCAT 1563 >seq4760 Length=7449 Score = 96.9 bits (106), Expect = 7e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||| | | || |||||||| | || ||||| | ||| |||||||| || Sbjct 2082 ACCACCACAAAATTGGAGCACCAGATGAAGTGTTGAATCTTTCTAGATATTGTAGTCCGC 2023 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||| |||| || | ||| || || ||||| |||||||||||||| || || Sbjct 2022 TAATATGCGTCCATTTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGCTCTGGTGG 1963 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| || || |||| || || ||||||| | ||| |||| || |||| ||| | Sbjct 1962 AATACCTTCTTTATCTTAAATTTTAGCTTTTATATTTTCGGTAGTATCTGAAGGTTCTAG 1903 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAA-AGTCTTAACGAATATCTGCATTTT 283102 || | ||| | | || | ||| || ||| || || || || |||||||| Sbjct 1902 CTCCA-AGTTAATGGTTTTCTCGTTAAGAGTTTTTACAAAGATTTGCATTTT 1852 >seq17053 Length=11609 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 9634 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 9690 >seq8804 Length=19330 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 13271 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 13327 >seq6380 Length=48394 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 38096 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 38152 >seq5820 Length=15157 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 3445 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3501 >seq4027 Length=10367 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1246 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1190 >seq2705 Length=26899 Score = 95.1 bits (104), Expect = 3e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||| ||| || ||||| || | || ||| | ||||| || |||||| Sbjct 25954 CCACCACGCAAGCGGAGCACCAGTTGAAGTGTTGACTCTCTCTGGATATTAGAGTCAGTT 26013 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| | |||| || | ||| | || ||| | || |||||||| || | ||| Sbjct 26014 AATGTGTGTCCATTTTCCAATTGCTAACCAGCAGAAATTAAACGTTGCTGAACGGGTGGA 26073 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| | || |||||||| || | |||||| | ||||||||||| |||| ||| || Sbjct 26074 ATACCATGTTTATCTTGGATTTTAGATTTTACATTCTCGATAGTGTCGGAAGGTTCTACC 26133 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 | | || || || || || | | ||| || || || || |||||||| Sbjct 26134 CCCAAGGTAATGGTTTTCCCGGGAAGAGTTTTTACAAAGATTTGCATTTT 26183 >seq1453 Length=1845 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1633 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1689 >seq1062 Length=7096 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2757 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 2813 >seq340 Length=74063 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 26222 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 26278 >seq29692 Length=5379 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 4455 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 4399 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 4600 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 4656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045915287369836