Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq56942 145 2e-29 seq4449 136 1e-26 >seq56942 Length=2534 Score = 145 bits (160), Expect = 2e-29 Identities = 164/219 (75%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| || |||||||| || || || || ||||| || || || || ||| Sbjct 51 AAAATGC---AAATCTTTGTGAAAACGCTGACTGGTAAGACGATTACGCTGGAAGTTGAA 107 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| || ||||| |||||| || ||||| || ||||| || || || || Sbjct 108 CCATCGGACACGATTGAGAATGTCAAAGCGAAAATTCAAGATAAAGAGGGTATACCGCCA 167 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||||| || |||||||| || |||||||||||||||||| | || | |||| Sbjct 168 GATCAGCAACGTCTGATCTTCGCTGGCAAACAGCTCGAAGATGGACGCACATTGTCCGAC 227 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || ||| | ||||| ||||| || || || | |||||| Sbjct 228 TACAACATACAAAAGGAATCGACGCTTCACTTGGTTTTG 266 >seq4449 Length=67262 Score = 136 bits (150), Expect = 1e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || ||||| ||||| || ||||| || ||| || Sbjct 64284 CAGATCTTCGTTAAGACCCTAACGGGCAAAACCATCACTCTTGAGGTTGAGCCCTCTGAT 64343 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||||||||||||||||| ||||| ||||| || || || Sbjct 64344 ACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCAACAG 64403 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || |||||||| |||||||| | || || | || || || || Sbjct 64404 CGTTTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGACTACAATATC 64463 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||||||||| || ||||| | || ||| Sbjct 64464 CAAAAAGAATCTACTTTGCATTTGGTGTTG 64493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202783715336196