Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28]
61,434 sequences; 410,872,512 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq4449 125 7e-24
seq34347 84.2 2e-11
>seq4449
Length=67262
Score = 125 bits (138), Expect = 7e-24
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| || |||||||| ||||||| ||||| || || || || || || ||||| |
Sbjct 64509 CGCCACCACGTAGACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAG 64450
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
|||||||||| | || || ||||| ||||| || ||||||| |||||||| || | |
Sbjct 64449 AGAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAG 64390
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
||| | ||| |||||| ||| | || |||| || | | ||| || | |||
Sbjct 64389 GAATTCCCTCTTTGTCC-TGAATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCA 64331
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | || || ||||| ||||| || ||||| ||||| |||||||||||
Sbjct 64330 ACCTCAAGAGTGATGGTTTTGCCCGTTAGGGTCTTAACGAAGATCTGCATGTT 64278
>seq34347
Length=4815
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || || || || |||| ||||| ||| ||| ||||| | ||| || |||
Sbjct 1562 GCCGCCACGCAGGCGCAAAACCAAATGCAATGTGGACTCGTTCTGTACGTTGTAATCGAT 1503
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||||||| | || | |||||||| ||||||||||||| |||||| | | | ||
Sbjct 1502 GAGGGTGCGATGATCCTGCAGCTGCTTACCGGCGAATATCAAGCGCTGCTCCTTCTTCGG 1443
Query 41755 AACGCTCTCCTTGTCC 41770
| |||||| || |||
Sbjct 1442 GATGCTCTCTTTCTCC 1427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 461948985200800
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |