Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq20420 102 9e-17
seq34142 95.1 1e-14
seq5336 91.5 2e-13
seq75 91.5 2e-13
seq124133 86.0 7e-12
>seq20420
Length=11055
Score = 102 bits (112), Expect = 9e-17
Identities = 79/93 (85%), Gaps = 1/93 (1%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1737 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1678
Query 60126 TACTACCGAGGAT-TGAATATATAACTTGAATA 60157
||||| ||||||| ||| | ||||| || ||||
Sbjct 1677 TACTATCGAGGATGTGATTTTATAAGTTAAATA 1645
>seq34142
Length=1455
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 808 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 867
Query 60126 TACTACCGAGGATTG 60140
||||| |||||||||
Sbjct 868 TACTATCGAGGATTG 882
>seq5336
Length=1527
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 963 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 904
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 903 TACTATCGAGGAT 891
>seq75
Length=1704
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 698 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 757
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 758 TACTATCGAGGAT 770
>seq124133
Length=1756
Score = 86.0 bits (94), Expect = 7e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 885 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 826
Query 60125 ATACTACCGA 60134
|||||| |||
Sbjct 825 ATACTATCGA 816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570772631926880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |