Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq25219 113 4e-20
>seq25219
Length=1370
Score = 113 bits (124), Expect = 4e-20
Identities = 223/328 (68%), Gaps = 8/328 (2%)
Strand=Plus/Minus
Query 16070 TCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACA 16129
|| || |||||||| ||||| || ||| | || ||||||||||| || | || ||
Sbjct 558 TCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAGTTCATTCCGATAAGATTGACG 499
Query 16130 GGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTT 16189
|| | || |||||||| || | || || || || || |||||| ||| || ||| |
Sbjct 498 GGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACTGCTTCAGCGATGATGTCTATG 439
Query 16190 ACTACACTATTTAACGGAGGGTTT----AATAAGTGTTTAAACATTATACAAGCAAAATC 16245
| | | | || | ||||| | || || || ||||| | |||||| || ||
Sbjct 438 A-TGCGTTCCTT---GCTTGGTTTCTGCACCAAATGCTTGAACATCAGACAAGCGAAGTC 383
Query 16246 ACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAG 16305
||||| | ||| ||||| | || | |||||| || ||||||||||| ||||| ||
Sbjct 382 GCAATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGACCGGGCATGAG 323
Query 16306 TCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAAC 16365
|| || || || | ||| || || | || || || ||||| || ||||||||
Sbjct 322 ACCGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTGAAGAAAATCCCTTCAAC 263
Query 16366 TGCGGCAAATGCAACCAATCGCTCACCG 16393
||| |||||||||| | || ||||||
Sbjct 262 TGCAGCAAATGCAATGATACGTTCACCG 235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 461666782445600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |