Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq25219 113 4e-20 >seq25219 Length=1370 Score = 113 bits (124), Expect = 4e-20 Identities = 223/328 (68%), Gaps = 8/328 (2%) Strand=Plus/Minus Query 16070 TCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACA 16129 || || |||||||| ||||| || ||| | || ||||||||||| || | || || Sbjct 558 TCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAGTTCATTCCGATAAGATTGACG 499 Query 16130 GGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTT 16189 || | || |||||||| || | || || || || || |||||| ||| || ||| | Sbjct 498 GGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACTGCTTCAGCGATGATGTCTATG 439 Query 16190 ACTACACTATTTAACGGAGGGTTT----AATAAGTGTTTAAACATTATACAAGCAAAATC 16245 | | | | || | ||||| | || || || ||||| | |||||| || || Sbjct 438 A-TGCGTTCCTT---GCTTGGTTTCTGCACCAAATGCTTGAACATCAGACAAGCGAAGTC 383 Query 16246 ACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAG 16305 ||||| | ||| ||||| | || | |||||| || ||||||||||| ||||| || Sbjct 382 GCAATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGACCGGGCATGAG 323 Query 16306 TCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAAC 16365 || || || || | ||| || || | || || || ||||| || |||||||| Sbjct 322 ACCGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTGAAGAAAATCCCTTCAAC 263 Query 16366 TGCGGCAAATGCAACCAATCGCTCACCG 16393 ||| |||||||||| | || |||||| Sbjct 262 TGCAGCAAATGCAATGATACGTTCACCG 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461666782445600