Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq79726 477 9e-130 seq25219 127 2e-24 >seq79726 Length=8148 Score = 477 bits (528), Expect = 9e-130 Identities = 1060/1581 (67%), Gaps = 43/1581 (3%) Strand=Plus/Plus Query 22103 GTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 ||||||||||| || ||||| || || | ||| ||||| || ||||| || || |||||| Sbjct 3804 GTCTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATG 3863 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || ||||| || ||| |||||| || | || || ||||| ||||||||||| || || Sbjct 3864 CCAGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTC 3923 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 || ||| | | |||||||| ||||| |||||||| ||||| || | |||||| Sbjct 3924 GGTTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCA 3983 Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 ||||| || || | |||| ||| || ||||| || ||||||||||| | | ||| Sbjct 3984 GCCATTTTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCACGGATT 4043 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGT-ATGATCAAATTTTT 22401 ||| || || ||||| ||||| || || | ||||| ||||| ||| || Sbjct 4044 TCTTGTGGAATTCGCTCGATTTGCTGGATTGATCC-TCGTTGTGCGATGATTTCATTCTT 4102 Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461 || ||||| |||||| | | | || | ||| || | || || | || || | Sbjct 4103 CATGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGAT 4162 Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521 ||| |||||||| |||| ||| || | | ||| ||||| |||||| |||| || || || Sbjct 4163 TTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGA 4222 Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581 ||| ||||| || || || || || || ||||| |||||||| || || | ||| ||||| Sbjct 4223 TTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGA 4282 Query 22582 GTTTCTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGTCCCACAGATCG 22639 ||| || | |||||||| | |||||| ||| ||||| | ||| ||||||||||| Sbjct 4283 GTTCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGC--CCAATCCCACAGATCA 4340 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCT 22699 | || | |||| |||||| ||||| || | | || ||| | || | || Sbjct 4341 GTTGG---TTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCC 4397 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 || || |||||||| || ||| || |||| ||||| ||||| ||||| | || || Sbjct 4398 TCATAGGTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCA 4457 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGA-----CGCTTTCGT 22814 || || || || |||||||||| | ||| | | | |||| |||| |||| Sbjct 4458 TAGTAGATGGTTTCGAAGATTTGTTGGTTGA-----GAAGTTGCGATTGTTCGCTCTCGT 4512 Query 22815 ACGGCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGT 22873 | || ||| ||||||| | || ||||| || | || ||||| || || ||||| || Sbjct 4513 ATGG-ATAGCGCATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGG 4571 Query 22874 CGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTT 22933 |||| | || || || ||||| |||| || || |||| || ||| || Sbjct 4572 CGGTGTCGTGTGTTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATT 4631 Query 22934 CTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA---- 22989 |||||||||| | ||||||||| || || | | || ||||| Sbjct 4632 TTGTTCAAGTTGCGGGTCACAATCTTTGTGACTTGCTTCAACTTCTGGAAATCGTACTTC 4691 Query 22990 --AACGCCCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCC 23047 | || || || || ||| |||| | || || || || | ||||| || || Sbjct 4692 TTATCG--GGAGTG----ACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCA 4745 Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 | ||| || | | |||||| ||||| || || || ||||| || ||||| || ||| Sbjct 4746 ATCTCATCCGGTGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTG 4805 Query 23108 CCCAAATTGCTCTGGTTGCTT----TTTCGATTGCACGAATCCTTGTAGAGCATGTACGG 23163 || | || ||| |||| || || || ||||| | ||| ||||||||||||||||| Sbjct 4806 CCGA---TGTTCT-GTTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGG 4861 Query 23164 CGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACG 23223 || || ||||| || || || || || || || ||| | || || || | ||| Sbjct 4862 AGTTCCGGTCTCCACTTGAGATTCTATAATGGCAAACCAAAGCGTTTGTGCTTTCACAGT 4921 Query 23224 TCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTC-AAATTCGGCACCGT 23282 || | | || || | |||||| ||||| | | || || ||| | || Sbjct 4922 TCTGTTTGCCTTTCCCTCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCA 4981 Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342 || || || ||||| | | || ||||| | | ||| ||| || Sbjct 4982 GAC-TTCATGCAAACCGGGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTT 5040 Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402 | || || |||| || ||||| || ||||||||||| ||||||| ||||| || | Sbjct 5041 CCACTCGCTTCATGAACAGATCGGGAATCCATAGAGCATAGAACAAATCGCGAGCTCTGT 5100 Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462 |||||| || ||||||||||| ||||||||||| || || || | ||||| |||||| | Sbjct 5101 TCTCCTCCTTTCCGGTGTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGG 5160 Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522 |||| | ||||| ||| || || || |||| ||| ||| || || ||||| || || | Sbjct 5161 GCTCCAAGTAAATGGCGAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAG 5220 Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582 | ||||||| || |||| ||||| || || || ||||| || | ||| | || | Sbjct 5221 CGACGTTGTTGAACCCTCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCCAG 5280 Query 23583 CCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATT 23642 | | || | || || || | || | ||| || | || || |||||||| | || | Sbjct 5281 CAATACCGGTTCCCTTGGCCCTAATGCAGTGCACATTGATGCCAATGCCTCCCGCAGACT 5340 Query 23643 TCGATATCATCGCGCATTGTT 23663 | |||||||| ||||| |||| Sbjct 5341 TTGATATCATGGCGCAATGTT 5361 Score = 140 bits (154), Expect = 3e-28 Identities = 301/450 (67%), Gaps = 0/450 (0%) Strand=Plus/Plus Query 23710 CAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGC 23769 || ||||||||||||||| |||| ||||| || | |||| |||||| || Sbjct 5637 CAGGAAACACGAAGACATCTGCGGCCGTCTTGTAGCCGCGGCAAACATTGTCGGAGACGC 5696 Query 23770 GTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTC 23829 || || ||||| | | |||| | |||||||| || |||||| ||||||||||||| Sbjct 5697 ATGGGTGAAGTACCTCTCAGACAAGAAGTTGTACGTTTCAATGGCGCCATCAATGTCCTC 5756 Query 23830 TCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCC 23889 |||||||| || | | || | ||| | ||| | || || | ||| | | || Sbjct 5757 ACCGTGTATTCCAACAGACACTCTCATTAGCATATGCTGTGGACGCTCCGCAATCTTCCC 5816 Query 23890 GTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAA 23949 |||||| || | |||||| ||||| | | ||| || || ||||| || | || ||| Sbjct 5817 GTTAATCTTCAGCAGATACGAACGCTCTAGCGTCTTGAAACCAAAGTAATTGTAACCAAA 5876 Query 23950 GTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTGTA 24009 ||| | |||| | || || |||||||| |||| |||||| | | || ||||| Sbjct 5877 GTCTCTGTCGTAGATAATTGCGGAATTCAATCGGTCAGCATTGTCCTGTACGACTTTGTA 5936 Query 24010 ATGAAAATTCGATATCATCGGCGTTTTAACGCCGGTCTTTGGATCGATCGCTTCATACAT 24069 ||| |||| || || | || |||| | | ||| | | ||| | || | |||| Sbjct 5937 ATGGAAATCAGAGATTAATGGTGTTTGAGAGTTGGTTTCGGCATCTACTGCGTTGTACAA 5996 Query 24070 ATCGATAATGACATCGAAAAAAGAATCTTTAGTCTCCTTGTGCAAATTAGACACGGCCAA 24129 ||| | || || ||| |||| | | || || ||||||||||| || || || | | Sbjct 5997 ATCACTTATAACCTCGGAAAATGCTTTCTTTGTTTCCTTGTGCAAGTTGGAAACTACAAT 6056 Query 24130 TCTAGCCGCAAGCAACGAATAGTCGGAATG 24159 | || ||||||| || |||||| | ||| Sbjct 6057 GCGTGCAGCAAGCACCGCATAGTCCGCATG 6086 >seq25219 Length=1370 Score = 127 bits (140), Expect = 2e-24 Identities = 264/393 (67%), Gaps = 0/393 (0%) Strand=Plus/Plus Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| || ||| || | |||||| |||| | || | |||| || | Sbjct 185 AAGAAGGCTGACTGGGCACTTGCATGGATCTCAAGCAAGTCCGCAAACTTCGGTGAACGT 244 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 | || || || || || || ||||| || ||||| |||||||| || |||| || Sbjct 245 ATCATTGCATTTGCTGCAGTTGAAGGGATTTTCTTCAGCGGCAGCTTCGCATCAATCTTC 304 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| ||||||| ||||| || |||||||| || || || ||||||| |||| || ||| Sbjct 305 TGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTTACATTCTCCAACGAGCTGATTTCACGC 364 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG 58154 |||||||| |||||| || || || || || |||| | || | || | ||||| Sbjct 365 GACGAGGGACTCCATTGCGACTTCGCTTGTCTGATGTTCAAGCATTTGGTGCAGAAACCA 424 Query 58155 ACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | ||| |||||| | ||||| ||| | || || ||| ||| || | || || | Sbjct 425 AGCAAGGAACGCATCATAGACATCATCGCTGAAGCAGTCAAGATTGAGCAAGAATTCTTA 484 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || || || | |||| |||||| || | ||||| | || ||| Sbjct 485 ACAGACGCTCTGCCCGTCAATCTTATCGGAATGAACTGCGAACTTATGTCTCAATATATT 544 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACTG 58307 || ||||| |||||| | || | | |||||| Sbjct 545 GAATTTGTAGCCGACCGTCTGCTTCGTGAACTG 577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444951784192320