Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq79726 378 9e-100
seq25219 145 1e-29
>seq79726
Length=8148
Score = 378 bits (418), Expect = 9e-100
Identities = 980/1482 (66%), Gaps = 24/1482 (2%)
Strand=Plus/Plus
Query 62036 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62095
|||||||| ||||| || || | | | ||| || || || ||||| |||||||| ||
Sbjct 3806 CTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCC 3865
Query 62096 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62155
|| || || || |||| ||| | || || || || | ||| || ||||
Sbjct 3866 AGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCGG 3925
Query 62156 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62215
|| || | ||| || || | |||||||||||||||||||| || ||||| || |||||
Sbjct 3926 TTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGC 3985
Query 62216 CATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62274
|||||| ||| ||| | | || ||||| | ||| || || | ||| | || |
Sbjct 3986 CATTTTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCAC-GGATTT 4044
Query 62275 CTTCTGGAA---GGTTTGTATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331
||| ||||| | | | | ||| || ||||| | | | | || || |||||| |
Sbjct 4045 CTTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTCA 4104
Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391
| ||||| | ||| || | ||| || | | | |||| || || | || || | ||
Sbjct 4105 TGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATTT 4164
Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451
|||| || ||||||| || | || |||| || || || ||||| || | ||| |
Sbjct 4165 GGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGATT 4224
Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511
| || || || | ||||| || || || || |||||||| || || | || | |
Sbjct 4225 CGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAGT 4284
Query 62512 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACG 62571
| |||| ||||| | ||||| || || ||| |||||| ||| ||||| | |
Sbjct 4285 TCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGTTG 4344
Query 62572 GTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGC-GTACGATCCTACATAT 62630
|| | || || || || || ||||| | | || | ||| ||||
Sbjct 4345 GTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCT-CATAG 4403
Query 62631 GTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAA 62690
|| || |||||||| |||||| || |||| ||| || ||||||| ||| || || ||
Sbjct 4404 GTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAG 4463
Query 62691 ATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT 62750
|||||||| ||||| | | || ||| ||| | || ||| || |||||||
Sbjct 4464 ATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCGC 4523
Query 62751 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62810
| ||||| | ||||| || |||||||||||||| || ||||| || | |||| |
Sbjct 4524 ATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTG 4583
Query 62811 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62870
|| || | | || ||||| || || || |||| | || || ||||| || | ||
Sbjct 4584 TTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTG 4643
Query 62871 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---T 62924
| | ||||| ||||| || | ||||| || | ||||| | | |||
Sbjct 4644 CGGGTCACAAT--CTTTG-TGACTTGCTTCAACTTCTGGAAATCGTACTTCTTATCGGGA 4700
Query 62925 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCC 62984
| || |||||||||| |||| || |||| || || || || | ||||| | |
Sbjct 4701 GTGACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCG 4760
Query 62985 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 63044
| || | | |||||||||||||||||||| |||||||| || || | || ||||||
Sbjct 4761 GAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGA 4820
Query 63045 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63104
|| ||| ||| || ||||| || || || ||| | ||||| || || || | |||
Sbjct 4821 TTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGA 4880
Query 63105 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA---TTATAGATTTGTATCTCCTT 63161
||||||||||| || ||| | | | || || | || | |||| | ||| |
Sbjct 4881 GATTCTATAATGGCAAACCAAAGCGTTTGTGCTTTCACAGTTCT--GTTTGCCTTTCCCT 4938
Query 63162 TCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTA 63221
|| | ||||| | || |||| ||||||| || ||||| || | | ||| |
Sbjct 4939 CCT-TCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACCG 4997
Query 63222 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63281
|| || | || || |||||||| ||||| || ||||| | | |||||| ||||| ||
Sbjct 4998 GGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAAC 5057
Query 63282 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
||||| |||||||| ||||| ||| || | ||| | | ||| | ||||| ||||| ||
Sbjct 5058 AGATCGGGAATCCATAGAGC-ATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGGT 5116
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
||||| || | ||| | |||| | | || || |||||||| || |||||||| |||||
Sbjct 5117 GTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGGC 5176
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | || || || ||| ||||| || || | || | |||| ||| || | |
Sbjct 5177 GAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTGAACCC 5236
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACC 63502
||||| |||||||| || |||||||| |||| || || ||
Sbjct 5237 TCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCC 5278
Score = 84.2 bits (92), Expect = 3e-11
Identities = 193/287 (67%), Gaps = 4/287 (1%)
Strand=Plus/Plus
Query 64010 AAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGC 64069
|||| ||| |||||||||||||| | || || | | || | || || || | ||
Sbjct 6256 AAATGCTTTCTTTGTTTCCTTGTGCAAGTTGGAAACTACAATACGTGCAGCAAGCACCGC 6315
Query 64070 ATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTC 64129
||| |||| ||| ||||| | |||| ||| ||||||| |||| | | || || ||
Sbjct 6316 ATAGTCCGCATGGCTAGTAGTTAAGCTGGCCGCTGTTTCGGCAGCCAAATTATCTAACTC 6375
Query 64130 TACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATC 64189
|| ||||||||| | |||| || ||| ||||||| | || | || ||
Sbjct 6376 CTGGGTGGTTACTCCACTGTATAGACCACTAATTACCTTCAATGTGATCACCACGGGGTC 6435
Query 64190 TATATGATCCGTGTTTAAGCCATAGCACAATTTTCTAATACGAGACGTGATTTTATCAAA 64249
| ||| |||| | ||||||||||| ||| || | || || |||||||| ||
Sbjct 6436 AACGAAGTCCATGTTGAGGCCATAGCACAGCTTTTGGATTCTCGATGTTATTTTATCCAA 6495
Query 64250 CATGACATTT--TCCTTGTATCCATTTCGTTTAATGACAAACATTTT 64294
|||| |||| |||||| ||||| ||||| | ||| |||||||
Sbjct 6496 -ATGA-ATTTCCTCCTTGCGTCCATCGCGTTTGAAAACATACATTTT 6540
>seq25219
Length=1370
Score = 145 bits (160), Expect = 1e-29
Identities = 295/436 (68%), Gaps = 3/436 (1%)
Strand=Plus/Minus
Query 33396 CCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33455
|||| |||| || || | || || || ||||| |||||| ||| | ||| ||
Sbjct 579 CCCAGTTCACGAAGCAGACGGTCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAG 520
Query 33456 TTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACC 33515
|||||||| || || || || || ||||| | || | |||||||| ||||| ||
Sbjct 519 TTCATTCCGATAAGATTGACGGGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACT 460
Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575
|| | | || || | | | | ||| | || ||| || | ||||| || |||
Sbjct 459 GCTTCAGCGATGATGTCTATGATGCGTTCCTTGCTTGGTTTCTGCACCAAATGCTTGAAC 400
Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635
|||| ||| ||||| ||||| || || |||||||| | ||| | ||||| || ||
Sbjct 399 ATCAGACAAGCGAAGTCGCAATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAAT 340
Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695
|| || |||||||| || || ||||| || ||||| || || || ||||| |||
Sbjct 339 GTAAGACCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTG 280
Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGT 33753
||||| || ||||| ||||||||||| ||||| | | || || | ||| ||
Sbjct 279 AAGAAAATCCCTTCAACTGCAGCAAATGCAATGATACGTTCACCGAAGTTTGCGGACTTG 220
Query 33754 CATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33812
| || ||||| | ||||| || |||||||| || ||||| || | ||||| ||
Sbjct 219 CTTGAGATCCATGCAAGTGCCCAGTCAGCCTTCTTCTTCACACATGGGAGTGTTTCAATT 160
Query 33813 GCATTAAAGAGATAGT 33828
||||| || |||||||
Sbjct 159 GCATTGAAAAGATAGT 144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628666639826880
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