Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq79726 378 9e-100 seq25219 145 1e-29 >seq79726 Length=8148 Score = 378 bits (418), Expect = 9e-100 Identities = 980/1482 (66%), Gaps = 24/1482 (2%) Strand=Plus/Plus Query 62036 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62095 |||||||| ||||| || || | | | ||| || || || ||||| |||||||| || Sbjct 3806 CTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCC 3865 Query 62096 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62155 || || || || |||| ||| | || || || || | ||| || |||| Sbjct 3866 AGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCGG 3925 Query 62156 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62215 || || | ||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct 3926 TTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGC 3985 Query 62216 CATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62274 |||||| ||| ||| | | || ||||| | ||| || || | ||| | || | Sbjct 3986 CATTTTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCAC-GGATTT 4044 Query 62275 CTTCTGGAA---GGTTTGTATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331 ||| ||||| | | | | ||| || ||||| | | | | || || |||||| | Sbjct 4045 CTTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTCA 4104 Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391 | ||||| | ||| || | ||| || | | | |||| || || | || || | || Sbjct 4105 TGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATTT 4164 Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451 |||| || ||||||| || | || |||| || || || ||||| || | ||| | Sbjct 4165 GGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGATT 4224 Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511 | || || || | ||||| || || || || |||||||| || || | || | | Sbjct 4225 CGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAGT 4284 Query 62512 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACG 62571 | |||| ||||| | ||||| || || ||| |||||| ||| ||||| | | Sbjct 4285 TCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGTTG 4344 Query 62572 GTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGC-GTACGATCCTACATAT 62630 || | || || || || || ||||| | | || | ||| |||| Sbjct 4345 GTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCT-CATAG 4403 Query 62631 GTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAA 62690 || || |||||||| |||||| || |||| ||| || ||||||| ||| || || || Sbjct 4404 GTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAG 4463 Query 62691 ATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT 62750 |||||||| ||||| | | || ||| ||| | || ||| || ||||||| Sbjct 4464 ATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCGC 4523 Query 62751 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62810 | ||||| | ||||| || |||||||||||||| || ||||| || | |||| | Sbjct 4524 ATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTG 4583 Query 62811 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62870 || || | | || ||||| || || || |||| | || || ||||| || | || Sbjct 4584 TTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTG 4643 Query 62871 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---T 62924 | | ||||| ||||| || | ||||| || | ||||| | | ||| Sbjct 4644 CGGGTCACAAT--CTTTG-TGACTTGCTTCAACTTCTGGAAATCGTACTTCTTATCGGGA 4700 Query 62925 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCC 62984 | || |||||||||| |||| || |||| || || || || | ||||| | | Sbjct 4701 GTGACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCG 4760 Query 62985 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 63044 | || | | |||||||||||||||||||| |||||||| || || | || |||||| Sbjct 4761 GAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGA 4820 Query 63045 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63104 || ||| ||| || ||||| || || || ||| | ||||| || || || | ||| Sbjct 4821 TTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGA 4880 Query 63105 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA---TTATAGATTTGTATCTCCTT 63161 ||||||||||| || ||| | | | || || | || | |||| | ||| | Sbjct 4881 GATTCTATAATGGCAAACCAAAGCGTTTGTGCTTTCACAGTTCT--GTTTGCCTTTCCCT 4938 Query 63162 TCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTA 63221 || | ||||| | || |||| ||||||| || ||||| || | | ||| | Sbjct 4939 CCT-TCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACCG 4997 Query 63222 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63281 || || | || || |||||||| ||||| || ||||| | | |||||| ||||| || Sbjct 4998 GGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAAC 5057 Query 63282 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340 ||||| |||||||| ||||| ||| || | ||| | | ||| | ||||| ||||| || Sbjct 5058 AGATCGGGAATCCATAGAGC-ATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGGT 5116 Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400 ||||| || | ||| | |||| | | || || |||||||| || |||||||| ||||| Sbjct 5117 GTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGGC 5176 Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460 | | || || || ||| ||||| || || | || | |||| ||| || | | Sbjct 5177 GAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTGAACCC 5236 Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACC 63502 ||||| |||||||| || |||||||| |||| || || || Sbjct 5237 TCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCC 5278 Score = 84.2 bits (92), Expect = 3e-11 Identities = 193/287 (67%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 64010 AAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGC 64069 |||| ||| |||||||||||||| | || || | | || | || || || | || Sbjct 6256 AAATGCTTTCTTTGTTTCCTTGTGCAAGTTGGAAACTACAATACGTGCAGCAAGCACCGC 6315 Query 64070 ATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTC 64129 ||| |||| ||| ||||| | |||| ||| ||||||| |||| | | || || || Sbjct 6316 ATAGTCCGCATGGCTAGTAGTTAAGCTGGCCGCTGTTTCGGCAGCCAAATTATCTAACTC 6375 Query 64130 TACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATC 64189 || ||||||||| | |||| || ||| ||||||| | || | || || Sbjct 6376 CTGGGTGGTTACTCCACTGTATAGACCACTAATTACCTTCAATGTGATCACCACGGGGTC 6435 Query 64190 TATATGATCCGTGTTTAAGCCATAGCACAATTTTCTAATACGAGACGTGATTTTATCAAA 64249 | ||| |||| | ||||||||||| ||| || | || || |||||||| || Sbjct 6436 AACGAAGTCCATGTTGAGGCCATAGCACAGCTTTTGGATTCTCGATGTTATTTTATCCAA 6495 Query 64250 CATGACATTT--TCCTTGTATCCATTTCGTTTAATGACAAACATTTT 64294 |||| |||| |||||| ||||| ||||| | ||| ||||||| Sbjct 6496 -ATGA-ATTTCCTCCTTGCGTCCATCGCGTTTGAAAACATACATTTT 6540 >seq25219 Length=1370 Score = 145 bits (160), Expect = 1e-29 Identities = 295/436 (68%), Gaps = 3/436 (1%) Strand=Plus/Minus Query 33396 CCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33455 |||| |||| || || | || || || ||||| |||||| ||| | ||| || Sbjct 579 CCCAGTTCACGAAGCAGACGGTCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAG 520 Query 33456 TTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACC 33515 |||||||| || || || || || ||||| | || | |||||||| ||||| || Sbjct 519 TTCATTCCGATAAGATTGACGGGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACT 460 Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575 || | | || || | | | | ||| | || ||| || | ||||| || ||| Sbjct 459 GCTTCAGCGATGATGTCTATGATGCGTTCCTTGCTTGGTTTCTGCACCAAATGCTTGAAC 400 Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635 |||| ||| ||||| ||||| || || |||||||| | ||| | ||||| || || Sbjct 399 ATCAGACAAGCGAAGTCGCAATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAAT 340 Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695 || || |||||||| || || ||||| || ||||| || || || ||||| ||| Sbjct 339 GTAAGACCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTG 280 Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGT 33753 ||||| || ||||| ||||||||||| ||||| | | || || | ||| || Sbjct 279 AAGAAAATCCCTTCAACTGCAGCAAATGCAATGATACGTTCACCGAAGTTTGCGGACTTG 220 Query 33754 CATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33812 | || ||||| | ||||| || |||||||| || ||||| || | ||||| || Sbjct 219 CTTGAGATCCATGCAAGTGCCCAGTCAGCCTTCTTCTTCACACATGGGAGTGTTTCAATT 160 Query 33813 GCATTAAAGAGATAGT 33828 ||||| || ||||||| Sbjct 159 GCATTGAAAAGATAGT 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628666639826880