Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq79726 158 1e-33 >seq79726 Length=8148 Score = 158 bits (174), Expect = 1e-33 Identities = 537/830 (65%), Gaps = 9/830 (1%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||| | || | || || ||||| ||||| | | || ||||| ||||| Sbjct 3810 TCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCCAGTC 3869 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || ||| |||| ||| | || || || |||| |||| |||| | || | | Sbjct 3870 TTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCGGTTCA 3929 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | | || || | | |||||||||||||| || ||||| || || ||||| |||||| Sbjct 3930 GCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGCCATT 3989 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 | | | | ||||||||||| || || || || | | || | | | Sbjct 3990 TTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCACGGATTTCTTGT 4049 Query 37030 GGTAAA---TCTAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086 || | || | || || || || || ||| | ||| |||||| |||||| Sbjct 4050 GGAATTCGCTCGATTTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTCATGTCA 4109 Query 37087 TTATTCCACATATTTCTACTTATT-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAA 37145 | | ||||| | | | ||| | | || || | | ||||||| |||| || | || || Sbjct 4110 TCGTCCCACA-AGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATTTGGAA 4168 Query 37146 ATCTCCAGATA--ATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203 || ||||| | | || | | ||||| || | | | | || || || |||| || || Sbjct 4169 CTCGCCAGACAGGACACGCCTGTTGTAGATGT-TCGAT-GTGTACGGCTCAAACGATTCG 4226 Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTT 37263 || || | | ||||| | |||||| || || |||||||| || || || || || Sbjct 4227 TTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAGTTC 4286 Query 37264 CTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGG 37323 || | || || || |||| ||| || || || ||||||||| | ||| ||||| Sbjct 4287 CTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGTTGGT 4346 Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383 | ||| |||||| || || || || || || ||||| | ||| || | | ||| || Sbjct 4347 TCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCTCATAGGTT 4406 Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443 || || ||||| | | || ||||| || || | |||||||| |||| || || Sbjct 4407 TCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAGATG 4466 Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503 |||||||| |||||| || | | || | || |||||| ||| ||| ||||| || Sbjct 4467 GTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCGCATC 4526 Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTA 37563 | || | | || || || || ||||||||||| || || || | ||| | || Sbjct 4527 AGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTT 4586 Query 37564 GATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATT 37613 ||| | || ||| || ||| || |||||| || |||||||| || Sbjct 4587 GATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTT 4636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467668594354240