Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq79726 405 7e-108 >seq79726 Length=8148 Score = 405 bits (448), Expect = 7e-108 Identities = 998/1502 (66%), Gaps = 25/1502 (2%) Strand=Plus/Plus Query 64829 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 64888 |||||||| ||||| || || | | | ||| || || || ||||| |||||||| || Sbjct 3806 CTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCC 3865 Query 64889 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 64948 || || || || |||| ||| | || || || || | ||| || |||| Sbjct 3866 AGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCGG 3925 Query 64949 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 65008 || || | ||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct 3926 TTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGC 3985 Query 65009 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATAT 65067 |||||| ||| ||| | | || ||||| | ||| || || | ||| | | | | Sbjct 3986 CATTTTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCACGGATT-T 4044 Query 65068 CTTCTGGAAG--GTTTGTATT-CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 65124 ||| ||||| | | | || ||| || ||||| | | ||| || || |||||| | Sbjct 4045 CTTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTCA 4104 Query 65125 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 65184 | ||||| | ||| || | ||| || | | | |||| || || |||| || | || Sbjct 4105 TGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATTT 4164 Query 65185 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 65244 | || || ||||||| || | || |||| || || || ||||| || | || | Sbjct 4165 GGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGATT 4224 Query 65245 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 65304 | || || || | ||||| || || || || |||||||| || || | || | | Sbjct 4225 CGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAGT 4284 Query 65305 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 65364 | |||| ||||| | ||||| || || |||| |||||| ||| ||||| | | Sbjct 4285 TCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGTTG 4344 Query 65365 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGT-ACGATCCTACATAT 65423 || | || || || || ||||| || || | ||| |||| Sbjct 4345 GTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCT-CATAG 4403 Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483 || ||||||||||| |||||| || |||||||| || ||||||| ||| || || || Sbjct 4404 GTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAG 4463 Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543 |||||||||||||| | | || ||| ||| | || ||| || ||||||| Sbjct 4464 ATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCGC 4523 Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603 | ||||| | ||||| || |||||||||||||| || ||||| || | |||| | Sbjct 4524 ATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTG 4583 Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663 || || | | || ||||| || || || |||| | || || ||||| || | || Sbjct 4584 TTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTG 4643 Query 65664 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATC---T 65717 | | ||||| ||||| || | ||||| || | ||||| | || ||| Sbjct 4644 CGGGTCACAAT--CTTTG-TGACTTGCTTCAACTTCTGGAAATCGTACTTCTTATCGGGA 4700 Query 65718 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 65777 | || |||||||||| |||| || |||| || ||||| || | ||||| | | Sbjct 4701 GTGACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCG 4760 Query 65778 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 65837 | || | | |||||||||||||||||||| ||||||||||| || | || |||||| Sbjct 4761 GAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGA 4820 Query 65838 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 65897 || ||| ||| || ||||| || || || ||| | ||||| || || || | ||| Sbjct 4821 TTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGA 4880 Query 65898 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTT--- 65954 ||||||||||| || ||| | | | || | | | || | ||| | |||| Sbjct 4881 GATTCTATAATGGCAAACCAAAGCGTTTGTGC---TTTCACAGTTCTGTTTGCCTTTCCC 4937 Query 65955 TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCA 66014 || | ||||| | || |||| ||||||| || ||||| || | | ||| || Sbjct 4938 TCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACCG 4997 Query 66015 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 66074 || || | || || |||||||| ||||| || ||||| | | |||||| ||||| || Sbjct 4998 GGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAAC 5057 Query 66075 AGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGT 66133 ||||| |||||||| ||||| ||| || ||||| | | ||| | ||||| ||||| || Sbjct 5058 AGATCGGGAATCCATAGAGC-ATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGGT 5116 Query 66134 ATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGC 66193 ||||| || | ||| | |||| | | || || ||||||| || |||||||| ||||| Sbjct 5117 GTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGGC 5176 Query 66194 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 66253 | | || || || ||| ||||| || || | || | |||| ||| || | | Sbjct 5177 GAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTGAACCC 5236 Query 66254 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 66313 ||||| |||||||| || || || || ||||| || || || | ||| | |||| || Sbjct 5237 TCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCCAGCAATACCGGTTCC-CT 5295 Query 66314 TG 66315 || Sbjct 5296 TG 5297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656970022116640