Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq25219 82.4 5e-11 >seq25219 Length=1370 Score = 82.4 bits (90), Expect = 5e-11 Identities = 163/236 (69%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCA--TTTGCGGCC 22797 |||| || | || ||||| || |||||||| | | | ||| | | || || || | Sbjct 241 ACGTATCATTGCATTTGCTGCAGTTGAAGGGAT--TTTCTTCAGCGGCAGCTTCGCATCA 298 Query 22798 ATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATT 22857 || |||||||||||||| || |||||||| || | | || ||||||||| ||||| Sbjct 299 ATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTTACATTCTCCAACGAGCTGATT 358 Query 22858 AGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAAC 22917 || ||||| || || || || ||||| |||||| || |||| | ||| ||| | Sbjct 359 TCACGCGACGAGGGACTCCATTGCGACTTCGCTTGTCTGATGTTCAAGCATTTGGTGCAG 418 Query 22918 AAACCGTGTCAGGACGATGCA-CAT-CAAATCATATCTGATGCCGTTGACATTGAG 22971 ||||| | |||| | ||| ||| | ||||| |||| || || | |||||| Sbjct 419 AAACCAAGCAAGGA--ACGCATCATAGACATCATCGCTGAAGCAGTCAAGATTGAG 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355598875884988