Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq79726 102 8e-17 seq59601 84.2 2e-11 >seq79726 Length=8148 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 153625 TGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTA 153684 |||| | ||||| || |||||||||||||| ||| | || || || ||| | || | | Sbjct 4711 TGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGA 4770 Query 153685 CTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTTTGC 153744 | || || | || | ||| ||||| || || |||| || ||||||| |||| Sbjct 4771 CAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGC 4830 Query 153745 GGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAA 153804 |||| ||||| || ||||| |||||||| || || ||||| || ||||| |||||||| Sbjct 4831 GGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAA 4890 Query 153805 T 153805 | Sbjct 4891 T 4891 >seq59601 Length=2262 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 139634 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT 139693 |||| ||| || ||||| ||||| || ||||||||||| ||| || ||| | | | Sbjct 2257 ATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAACATTT 2198 Query 139694 TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACG 139753 || | || |||| |||||||||||||| ||| | |||||||| || | || || ||| Sbjct 2197 TCGATGGTATCGGAGGGCTCCACCTCAAGGGTGATAGTCTTGCCCGTAAGGGTCTTAACG 2138 Query 139754 AATATTTGCAT 139764 || || ||||| Sbjct 2137 AAAATCTGCAT 2127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495157467843200