Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq79726 394 1e-104 >seq79726 Length=8148 Score = 394 bits (436), Expect = 1e-104 Identities = 1004/1510 (66%), Gaps = 26/1510 (2%) Strand=Plus/Plus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 |||||||| ||||| || || | | | ||| || || || ||||| |||||||| || Sbjct 3806 CTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCC 3865 Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827 || || || || |||| ||| |||| || || || | ||| || |||| Sbjct 3866 AGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCGG 3925 Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887 || || | ||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct 3926 TTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGC 3985 Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATAT 78946 |||||| ||| ||| | | || ||||| | ||| || || | ||| | | | | Sbjct 3986 CATTTTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCACGGATT-T 4044 Query 78947 CTTCTGGAAG--GTTTGTATT-CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 ||| ||||| | | | || ||| || ||||| | | ||| || || |||||| | Sbjct 4045 CTTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTCA 4104 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 | || || | ||| || | ||| || | | | |||| || || |||| || | || Sbjct 4105 TGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATTT 4164 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 | || || ||||||| || | || |||| || || || || || || | ||||| Sbjct 4165 GGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGATT 4224 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 | || || || | ||||| || || || || || ||||| || || | || | | Sbjct 4225 CGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAGT 4284 Query 79184 TTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242 | |||| ||||| | | | ||||| || || |||| |||||||||| ||||||| Sbjct 4285 TCCTAACACCGTGCTTAGCA-ATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGTT 4343 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || | ||||| | || || || || || || |||||| || | || || Sbjct 4344 GGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCTCATAG 4403 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 ||||| || ||||| ||| ||||| | |||||| || ||||||| |||||| || || Sbjct 4404 GTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAG 4463 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 ||||||||||| || | | |||||| ||| | || | ||| || ||||||| Sbjct 4464 ATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCGC 4523 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 | ||||| | ||||| || |||||||||||||| || ||||| || | |||| | Sbjct 4524 ATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTG 4583 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 || || | | || ||||| || || || |||| | || || ||||| || | || Sbjct 4584 TTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTG 4643 Query 79543 C---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC-CATC--- 79595 | | || || ||||| || | ||| | || | ||||| | | || ||| Sbjct 4644 CGGGTCACAAT--CTTTG-TGACTTGCTTCAACTTCTGGAAATCGTA-CTTCTTATCGGG 4699 Query 79596 TATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 79655 | || |||||||||| ||| | || |||| || ||||| || | ||||| | | Sbjct 4700 AGTGACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGC 4759 Query 79656 CGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTG 79715 | || | | || |||||||| || ||||| ||||| ||||| || | || ||||| Sbjct 4760 GGAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTG 4819 Query 79716 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTG 79775 ||| ||| ||| || ||||| || || || ||| ||||||| || || || | || Sbjct 4820 ATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTG 4879 Query 79776 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTT-- 79833 |||||||||||| || ||| | | | || | | | || ||| | |||| Sbjct 4880 AGATTCTATAATGGCAAACCAAAGCGTTTGTGC---TTTCACAGTTCTGTTTGCCTTTCC 4936 Query 79834 -TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 || | ||||| | || || | ||||||| || ||||| || || | || || Sbjct 4937 CTCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACC 4996 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 || || | | || |||||||| ||||| || || || | | ||||| ||||| || Sbjct 4997 GGGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAA 5056 Query 79953 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 80011 ||||| |||||||| ||||| ||| || | ||| | | ||| | |||||| ||||| | Sbjct 5057 CAGATCGGGAATCCATAGAGC-ATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGG 5115 Query 80012 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 80071 | ||||| || | ||| | |||| | | || || |||||||| || |||||||| |||| Sbjct 5116 TGTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGG 5175 Query 80072 CCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 80131 | | | || ||||| ||| ||||| || || | || | |||| ||| || | Sbjct 5176 CGAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTGAACC 5235 Query 80132 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCAC 80191 |||||| |||||||| || || || || ||||| || || || | ||| | |||| Sbjct 5236 CTCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCCAGCAATACCGGTTCCCT 5295 Query 80192 TGGCACGAAT 80201 |||| | ||| Sbjct 5296 TGGCCCTAAT 5305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716956199681440