Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq79726 365 6e-96 >seq79726 Length=8148 Score = 365 bits (404), Expect = 6e-96 Identities = 1002/1525 (66%), Gaps = 28/1525 (2%) Strand=Plus/Plus Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAGTACATGC 70849 |||||||| || ||||| || | | | ||| |||||| || ||||| |||||||||| Sbjct 3806 CTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTT-GTGCGTAGGTAGTACATGC 3864 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAG 70909 | || || || || |||| ||| | || || || || | ||| ||| | | Sbjct 3865 CAGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCG 3924 Query 70910 GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 70969 | || || | ||||| || | ||| ||||||||||||||||| || ||||| || |||| Sbjct 3925 GTTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAG 3984 Query 70970 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATA 71028 ||||||| ||| ||| | | || ||||| | ||| || || | ||| | || Sbjct 3985 CCATTTTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCAC-GGATT 4043 Query 71029 TCTTCTGGAA---GGTTTGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 |||| ||||| | | | | ||| || ||||| | | ||| || || ||| || Sbjct 4044 TCTTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTC 4103 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || || || | ||| || | ||| || | | | |||| || || |||| || | | Sbjct 4104 ATGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATT 4163 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 || || || ||||||| || | | |||| || || || ||||| || | || Sbjct 4164 TGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGAT 4223 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || || || | ||||| || || || || |||||||| || || | || || Sbjct 4224 TCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAG 4283 Query 71266 TTTCTAAGACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGA 71324 || |||| ||| || | | | ||||| || || |||| |||||| ||| ||||| | Sbjct 4284 TTCCTAACACCGTGCTTAGC-AATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGT 4342 Query 71325 TGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATA 71384 |||| | || || |||||| || | || |||| Sbjct 4343 TGGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCTCATA 4402 Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444 || ||||||||||| || ||||| |||||||| || ||||||| ||||||||| || Sbjct 4403 GGTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTA 4462 Query 71445 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 71504 ||||||||||| || | | |||||| ||| | || ||| || ||||||| Sbjct 4463 GATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCG 4522 Query 71505 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTT 71564 | ||||| | ||||| || ||||||||||| || || ||||| || | ||||| | Sbjct 4523 CATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGT 4582 Query 71565 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 71624 || || | | || ||||| || || || |||| | || || ||||| || | || Sbjct 4583 GTTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTT 4642 Query 71625 TC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC--- 71678 | | || || ||||| || | ||| | || | ||||| | || ||| Sbjct 4643 GCGGGTCACAAT--CTTTG-TGACTTGCTTCAACTTCTGGAAATCGTACTTCTTATCGGG 4699 Query 71679 TATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 71738 | || |||| ||||| |||| || |||| || ||||| || | ||||| | | Sbjct 4700 AGTGACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGC 4759 Query 71739 GGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 71798 || || | | ||| ||||||||||||||||| ||||||||||| || | || ||||| Sbjct 4760 GGAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTG 4819 Query 71799 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTG 71858 ||| ||| ||| || ||||| || || || || ||||||| || || || | || Sbjct 4820 ATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTG 4879 Query 71859 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTT-- 71916 |||||||||||| || ||| | | | || | | | | | ||| | |||| Sbjct 4880 AGATTCTATAATGGCAAACCAAAGCGTTTGTGC---TTTCACAGTTCTGTTTGCCTTTCC 4936 Query 71917 -TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCC 71975 || | ||||| | || || | ||||||| || ||||| | | | || || Sbjct 4937 CTCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACC 4996 Query 71976 AGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAA 72035 || || | || || |||||||| ||||| || || || | | ||||| ||||| || Sbjct 4997 GGGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAA 5056 Query 72036 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 72094 ||||| |||||||| ||||| ||| || | ||| | | ||| | |||||| ||||| | Sbjct 5057 CAGATCGGGAATCCATAGAGC-ATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGG 5115 Query 72095 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 72154 | ||||| || | ||| | |||| | | || || |||||||| || |||||||| |||| Sbjct 5116 TGTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGG 5175 Query 72155 CCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 72214 | | | || || || ||| ||||| || || | || | |||| ||| || | Sbjct 5176 CGAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTGAACC 5235 Query 72215 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 72274 |||||| |||||||| || || || || | ||| || || || | ||| | |||| Sbjct 5236 CTCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCCAGCAATACCGGTTCCCT 5295 Query 72275 TGGCACGAAT--ATTGCTAATTGAT 72297 |||| | ||| | ||| |||||| Sbjct 5296 TGGCCCTAATGCAGTGCACATTGAT 5320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669912726668960