Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq79726 96.9 4e-15 >seq79726 Length=8148 Score = 96.9 bits (106), Expect = 4e-15 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 156164 GCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTAC 156223 || ||||| |||||| | ||||||||||| || |||||||| |||||| ||| | Sbjct 3834 GCTGCCGGCTTTGTGCGTAGGTAGTACATGCCAGTCTTGAGGCCCGCCTTCCAGCCGAAG 3893 Query 156224 ATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTTT-GCCATGTACACGTTGAACGATTG 156282 | ||| | ||| | || ||| | ||| |||| |||| | | |||||||||||| Sbjct 3894 AAGTGAATCGAAGTCAATTTTC-CGTAGTTCGGTTCAGCCACATGAATGTTGAACGATTG 3952 Query 156283 ACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTCAAT 156324 |||||||||||| || || ||||| || || ||||||| ||| Sbjct 3953 ACTTTGATCGATGAACGCGCCCCTATCGGCAGCCATTTTAAT 3994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506087856534720