Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq79726 156 6e-33 seq25219 98.7 1e-15 >seq79726 Length=8148 Score = 156 bits (172), Expect = 6e-33 Identities = 364/546 (67%), Gaps = 10/546 (2%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCAC- 96864 ||||||||| | | | | ||||| || |||||||| ||| || ||| ||| ||| | Sbjct 5276 AACAAACGGTACCTCAAACGGCCTTGTTCCAATGCTGAGAGGGTTCAA--CAACGTCGCT 5219 Query 96865 -GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 | || || || || ||| || || ||||| || | ||| | |||||||| || Sbjct 5218 CGGTATGTCGACCAAGGAGGCGGCAAGCGACCAGGTGCCTTCGCCATTTACTTGGAGCCC 5159 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 ||||| ||||| | ||||| || | || || || ||| | || || ||| Sbjct 5158 TGGCATTCGGACATCTTTGAGTTCTTGGATTTGAAGAAGAACACCGGAAAGGAGGAGAAC 5099 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043 |||| | || ||||| ||||| || ||| | || ||| ||||||||||||| || | Sbjct 5098 AGAGCTCGCGATTTGTTCTATGCTCTATGGATTCCCGATCTGTTCATGAAGCGAGTGGAA 5039 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 | || ||| ||||| | |||||||| | || |||||| || || |||| Sbjct 5038 GCCGACGGCGACTGGTCTTTGATGTGCCCACATAAGTGCCCCGGTTTGCATGAAGTCTGG 4979 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG---ATACGTGAGA 97160 || || |||| |||| |||||| |||||| | ||||| | || ||| Sbjct 4978 GGGGAGAAGTTCGAGGAGCTGTACACCCGTTACGAGAAGGAGGGAAAGGCAAAC---AGA 4922 Query 97161 CGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220 || | |||| | || ||| ||||| | |||| || ||||| |||||| Sbjct 4921 ACTGTGAAAGCACAAACGCTTTGGTTTGCCATTATAGAATCTCAAGTGGAGACCGGAACT 4862 Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280 |||||||| |||||||| ||| | || ||||| ||| |||| || | |||||| Sbjct 4861 CCGTACATGCTCTACAAAGATGCTTGCAACCGCAAGTCCAATCAACAGAACATCGGCACC 4802 Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCA 97340 |||||| || ||||| ||||| || ||||| |||||| || | ||||| |||| || Sbjct 4801 ATCAAGTGCAGTAATCTTTGCACTGAGATTGTCGAGTACTCCGCACCGGATGAGATTGCT 4742 Query 97341 GTTTGC 97346 |||||| Sbjct 4741 GTTTGC 4736 Score = 125 bits (138), Expect = 1e-23 Identities = 338/510 (66%), Gaps = 24/510 (5%) Strand=Plus/Minus Query 97764 ATTGCTCGGTACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACT 97823 |||||| | ||||| | || ||||| | ||| | || || ||||| || ||| | || Sbjct 4306 ATTGCTAAGCACGGTGTTAGGAACTCGCTCCTGATTGCTCCAATGCCGACAGCTTCTACA 4247 Query 97824 TCCCAAGTGTTTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGA 97883 | ||| | ||||||| ||||| ||||| |||| ||| || ||||| ||| | || Sbjct 4246 GCGCAAATCCTTGGCAACAACGAATCGTTTGAGCCGTACACATCGAACATCTACAACAGG 4187 Query 97884 CGCACCCAGTCTGGAGAGTTTCAATTG----ACCAACGTGCACTT--GGTTCGA---GAC 97934 || || |||||| ||||| ||| | | |||| |||| || || || Sbjct 4186 CGTGTCCTGTCTGGCGAGTTCCAAATCGTCAATCAACACCTACTTAAGGATCTCACTGAG 4127 Query 97935 TTGGAACGGCTCAATCTGTGGAACGATGACATGGCCCAGTTGATCAT-GTACAACAATGG 97993 ||||| || ||||| ||||||||||| | ||||| | ||||| | || Sbjct 4126 TTGGA----CT-----TGTGGGACGATGACATGAAGAATGAAATCATCGCACAACGA-GG 4077 Query 97994 GTCCATTCAAAACATTACCATC--ATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTC 98051 || || || | || | | | || || |||| | || | ||||||||||| Sbjct 4076 ATCAATCCAGCAAAT--CGAGCGAATTCCACAAGAAATCCGTGAGCTGTACAAGACTGTG 4019 Query 98052 TGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGAC 98111 |||||||| || | || || | ||||||||||| || || | | ||| || Sbjct 4018 TGGGAGATATCGGTGCGGTCGACCATTAAAATGGCTGCCGATAGGGGCGCGTTCATCGAT 3959 Query 98112 CAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGTATGACTTCGATA 98171 || |||||||||||||| | | || || || || | |||| | |||||||||| Sbjct 3958 CAAAGTCAATCGTTCAACATTCATGTGGCTGAACCGAACTACGGAAAATTGACTTCGATT 3899 Query 98172 CACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCG 98231 ||||| | || ||||| |||||||||||| ||||||||||| || | |||||| || Sbjct 3898 CACTTCTTCGGCTGGAAGGCGGGCCTCAAGACTGGCATGTACTACCTACGCACAAAGCCG 3839 Query 98232 GCCACCAATGCCATACCATTTACGGTGGAC 98261 || | |||| || | || || |||||| Sbjct 3838 GCAGCACATGCGATCCAGTTCACTGTGGAC 3809 >seq25219 Length=1370 Score = 98.7 bits (108), Expect = 1e-15 Identities = 219/328 (67%), Gaps = 13/328 (4%) Strand=Plus/Plus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 ||||| || || || || || || ||||| || || || || | ||||| ||||| Sbjct 251 GCATTTGCTGCAGTTGAAGGGATTTTCTTCAGCGGCAGCTTCGCATCAATCTTCTGGCTG 310 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| ||||||||||| || || | |||||| | || || || |||||| Sbjct 311 AAGAAGCGCGGTCTCATGCCCGGTCTTACATTCTCCAACGAGCTGATTTCACGCGACGAG 370 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAG- 125611 || || || || ||||| || ||| |||| ||| || || |||||| Sbjct 371 GGACTCCATTGCGACTTCGCTTGTCTGATGTT---CAAGCATTTG--------GTGCAGA 419 Query 125612 -ATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670 | | ||| | ||| |||| |||| | | || || || | ||| || ||||| | Sbjct 420 AACCAAGCAAGGAACGCATCATAGACATCATCGCTGAAGCAGTCAAGATTGAGCAAGAAT 479 Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGT 125730 | |||| || | || || |||| | || || ||||||||| | || |||| | | Sbjct 480 TCTTAACAGACGCTCTGCCCGTCAATCTTATCGGAATGAACTGCGAACTTATGTCTCAAT 539 Query 125731 ACATAGAGTTTGTGGCAGATCGTCTACT 125758 | || || ||||| || || ||||| || Sbjct 540 ATATTGAATTTGTAGCCGACCGTCTGCT 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739704951364960