Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_004928.1 Length=167560 Score E Sequences producing significant alignments: (Bits) Value seq146010 116 4e-21 >seq146010 Length=1781 Score = 116 bits (128), Expect = 4e-21 Identities = 657/1039 (63%), Gaps = 55/1039 (5%) Strand=Plus/Plus Query 46045 TCGTGAATACCAATGTATCCTAGGGACACTGAACTTCTACCATTTTTAAATAACTCAATT 46104 || || || |||||||| || || || | |||| || |||||||| |||| ||| | Sbjct 187 TCATGTATTCCAATGTAGCCAAGAGAGATTGAAGCTCGTCCATTTTTGAATATTTCAGAT 246 Query 46105 ATGTCATCATCAGGTTTAAGACGAACCCCGAATGCACCTTCTTGGTAAAGAATAGGAGCA 46164 || ||| || ||| | |||||| || | || ||||| || | ||||| ||| Sbjct 247 ATACTATCGTCTTCTTTTAAACGAACGCCACAAGCGCCTTCCATATATAAGATAGGGGCA 306 Query 46165 ACAGTAGCTTTAACTCCTTTTAAGGAACTAATTCTACACATCAAAGCTTCAAAACACAGG 46224 ||| ||||||||| || | ||| | || | | ||| || |||| ||| | Sbjct 307 ACACGAGCTTTAACACCATCTAAACGAGCGATACGATTCATTAATGCTTTTTTACATAAA 366 Query 46225 TCCATTCGCTCATCGAACAATTCAGTAAATTTCTGTTCATTGAACTGTGTTCCAATATAA 46284 | || | ||| || ||||| |||||| ||||| || | | |||| Sbjct 367 ATTAAGCGGTTATCCAATAATTCCCAAAATTTGCTTTCATCTCCATGGGCTTCAATT--- 423 Query 46285 GAATCTAACGCAATACGAGGAAGATTCAGTGTTACAACGCCAAGATTATTGCGTCCATCA 46344 ||||| || || | || | ||| || || | |||||| ||||| ||| Sbjct 424 ---------GCAATTCGCGGTAAGTTTAAACTTATGACACCTAAATTATTTCGTCCGTCA 474 Query 46345 AGAATTTCATTGCCAGTTGAATCTTTC-CATATGCTC-AAGAAA-CTACGGCAACCCATT 46401 ||| || |||||| |||| | ||||| | | |||||| |||||||| |||||| Sbjct 475 TGAACTTGCTTGCCA------TCTTCCTCATATACGCCAAGAAAGCTACGGCATCCCATT 528 Query 46402 GGAGAAACAGGAACTGAA-GAACCGGTAATAGCTTTATTATTCTTAACCGAAAT----AA 46456 || | |||| ||||| || | || | | ||| | || ||| || Sbjct 529 GGCGTTT-------TGAATGAACCCGTTACCGCG--ACCA--CTTTATCGTAATTTAAAA 577 Query 46457 TGTCAGGATACATTCTTTTGCTTGCGCACTCTAACGCAAGTTGTTTAATATCATAGTTCG 46516 | || || ||||| | || ||||| || ||||| || |||| ||| |||||||| || Sbjct 578 TATCGGGGTACATACGCTTACTTGCACATTCTAATGCGAGTTTTTTGATATCATAATTGA 637 Query 46517 GATCATCTTTATAAAGATTAACACCTTCTTCAA---CAAACATAACAAGTTTAGGAAAAA 46573 |||| | | | ||||||| || |||| | |||||| ||| ||| ||||||| Sbjct 638 TATCACCAACCTTATGATTAACGCCATCTTTTATTGCAAACAC--CAATTTT-GGAAAAA 694 Query 46574 TAGGAGTTATTCCATCACGACCAAGACCTTTAATGCGGTTTTTAAGAATTGCTTTCTGAA 46633 | ||| | | || | ||||| | || |||| | ||| | || || | Sbjct 695 CTGCTGTTTTGTGGTTCTTTCCTAATCCTTTTAAACGTATTTTTAAAATAGATTCTTGGA 754 Query 46634 TCATTCGTTCAGTCCAGTCAGTTCCCGTA-CCAAATGTAATTGTTACAAAAGGCGTTTGT 46692 | | |||| | ||| | || || | ||||| || ||| ||||| |||||||| Sbjct 755 TGAGTCGTG-ATTCCCAACTTTTACCTAATCCAAAGCCAAATGTAACAAATGGCGTTTGA 813 Query 46693 CCGTTTGAACTAAAGAGAGTATTTACTTCATATTCATAAGCTTGGAATGCATCGTATACG 46752 || || | | ||| || || ||||| || ||| || |||||||||||| || Sbjct 814 CCATTAGCGGTGTGGAGTGTGTTCACTTCGTACTCAAGAGATTGGAATGCATCATAACAC 873 Query 46753 TCTTTTTCTGTTTTAGACTGGGCATAAT--TCAACGCATCAGCGATTTGCCATTTTTCTG 46810 |||||||| || | | ||||| | ||| | || |||||||| | | | Sbjct 874 TCTTTTTCAGTGCGATTTTTTGCATAGTGGTCA--GGATTTTTTATTTGCCACTCTGTCG 931 Query 46811 CATCCTCAATATGTTTTGCATAGGTGCGTTTAACATAAGGAGAAAGTACTTTATCTACAT 46870 | | | |||||||| ||| || ||||| | | | || | ||| | | Sbjct 932 CGACTTGCTTATGTTTTTGATAACTGATACTAACAAATTTTGCTAATATCTCATCGATAC 991 Query 46871 TAGCAAAAGTCGTTCCGCCGTATTGATGGGAAGCAACCTGTGCAGTAATTTGTGCCATAA 46930 | || |||||||| ||||| |||| || ||||| ||| ||||||| ||| | | Sbjct 992 GATTAATTGTCGTTCCACCGTAAATATGGCTTGCCACCTGAGCAATAATTTGAGCCGTGA 1051 Query 46931 TTGCAGTAGCAACGCCAATAGATTTAGGCGTTTCAATTTGAGCATTGCCTAATTTAAATC 46990 || || || ||||||||||||||| |||||||| || ||||| | |||||| | Sbjct 1052 CCGCGGTTGCCGTTGCAATAGATTTAGGCGGTTCAATTTCGGCGTTGCCCATTTTAAAAC 1111 Query 46991 CATTCTCAAGCATCCCCTTTAAATCGACTAAACAGCAATTGGTAAAC---GGAAGAGCAG 47047 | || |||||| || | || ||||| ||| ||||| ||||| |||| | | Sbjct 1112 CGTTGGTAAGCATGCCATCTAGATCGATTAACATGCAAT---TAAACATTGGAAAAAATG 1168 Query 47048 GAGAATAATCAATATCATG 47066 | | |||||| | |||||| Sbjct 1169 GTGCATAATCCAAATCATG 1187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535084369843200