Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq146010 107 2e-18 >seq146010 Length=1781 Score = 107 bits (118), Expect = 2e-18 Identities = 408/632 (65%), Gaps = 14/632 (2%) Strand=Plus/Plus Query 35581 ATCAGGGTAAAGACGCTTACTAGAACATTCCAATGCAAGTTGCTTAATGTCGTAGTTCGG 35640 ||| ||||| | ||||||||| | |||||| ||||| |||| || || || || || Sbjct 579 ATCGGGGTACATACGCTTACTTGCACATTCTAATGCGAGTTTTTTGATATCATAATTGAT 638 Query 35641 ATCTTCTGGTTTAAGGTTTAATCCTTCTTCTAAGAACATCACCAGCTTAGGAAACACCGG 35700 ||| | ||| | || | || |||| || | ||||| || ||||| || | Sbjct 639 ATCACCAACCTTATGATTAACGCCATCTTTTATTGCAAACACCAATTTTGGAAAAACTGC 698 Query 35701 AGTTATACCATCTTTACCTAAACCTTTAGTTCGAACTTTCAGGATCGCTTTCTGAATCAG 35760 ||| | | || ||||| ||||| || | ||| | || | || || || || Sbjct 699 TGTTTTGTGGTTCTTTCCTAATCCTTTTAAACGTATTTTTAAAATAGATTCTTGGATGAG 758 Query 35761 TTTTTCTTCCCAGCTAGTACCCATACCAAAGGTTAAAGTCACAAAAGGCGTTTGACCGTT 35820 | | |||||| || |||| | |||||| || || ||||| ||||||||||| || Sbjct 759 TCGTGATTCCCAACTTTTACCTAATCCAAAGCCAAATGTAACAAATGGCGTTTGACCATT 818 Query 35821 GGTGGAGAACAAAGTGTTGATCTCATATTCCAACGCCTGATATCCGTC-TAACGTTTCTT 35879 | || | | ||||| | || || || | | || || | || |||| | ||| Sbjct 819 AGCGGTGTGGAGTGTGTTCACTTCGTACTCAAGAGATTGGAATGCATCATAACACT-CTT 877 Query 35880 TTTCTGTCTTCTCTTGTGCATAGAGAGTATCAGCTTTGATT---CCGTAGGTTTCGGCAT 35936 |||| || | || ||||||| | | | ||| ||| | | || || | | Sbjct 878 TTTCAGTGCGATTTTTTGCATAGTGGTCAGGATTTTTTATTTGCCACTCTGTCGCGACTT 937 Query 35937 CAGCAAGGTGTTTATGATATGTTTTCTTAACATACGGTGCTAACACCTGATCGAT--GTT 35994 | ||||| ||||| | | ||||| | |||||| | || |||||| | | Sbjct 938 GCTTA---TGTTTTTGATAACTGATACTAACAAATTTTGCTAATATCTCATCGATACGAT 994 Query 35995 TGCAATTGTGGTCCCGCCATATTGATGACTTGCCACCTGTGCGATAATTTGAGCGGTTAC 36054 | |||||| || || || || ||| ||||||||||| || ||||||||||| || || Sbjct 995 T--AATTGTCGTTCCACCGTAAATATGGCTTGCCACCTGAGCAATAATTTGAGCCGTGAC 1052 Query 36055 AGCACATGCAACACCGATCGATTTAGGACTTTCGATTTGTGCGCTACCCAATTTAAAACC 36114 || ||| | || |||||||| ||| |||| ||| | |||| ||||||||| Sbjct 1053 CGCGGTTGCCGTTGCAATAGATTTAGGCGGTTCAATTTCGGCGTTGCCCATTTTAAAACC 1112 Query 36115 ATTCTCTAACATGTCTTTGAGATTAACAAGACA-GCAGTTAGTAAACGGCATAGCGGGTG 36173 || | |||| | | |||| | | ||| ||| ||| | || | | |||| Sbjct 1113 GTTGGTAAGCATGCCATCTAGATCGATTA-ACATGCAATTAAACATTGGAAAAAATGGTG 1171 Query 36174 CATAATCCATATCATGATAATGAATATCACCA 36205 ||||||||| ||||||||||||||| || ||| Sbjct 1172 CATAATCCAAATCATGATAATGAATTTCTCCA 1203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 523770682892480