Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq145812 82.4 8e-11 seq145402 82.4 8e-11 >seq145812 Length=1452 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 65379 TGGTGGTCCCTATTGGATTCGAACCAATGACCAACGACTTAGAACGACGTTGCTCTGTCC 65438 ||||| ||||| ||||||||||| ||||| ||| ||||||| | ||||||||| ||| Sbjct 2 TGGTGTCCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCC 61 Query 65439 AGCTGAGCTAA-GAGAC 65454 ||||||||||| ||||| Sbjct 62 AGCTGAGCTAAGGAGAC 78 >seq145402 Length=1205 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 7021 GTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCGAAAT-TGCAACTAAACAGTTCTT 7079 ||| ||||||| ||| ||||||||||| ||||||||| | | ||| | ||||| | ||| Sbjct 230 GTTAGCTTGTGCACCAGAATGAGGTTGTACGTTTGCGTAGTCTGC-GCCAAACAATGCTT 288 Query 7080 TAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCCATAATACC 7139 |||| || ||||| || | | ||| | ||| | | | | || ||||||||||| | Sbjct 289 TAGCGCGATCAATCGCTAACTGCTCAACAATATCAACATATTCACATCCGCCATAATAAC 348 Query 7140 GTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGCTTTCATAA 7199 | || ||||| || || || || || ||||| || || || || |||| ||| | Sbjct 349 GCTTTGATGGATAACCTTCCGCGTATTTATTGGTTAACTGTGAGCCTTGAGCTTGCATTA 408 Query 7200 CA 7201 || Sbjct 409 CA 410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554348301520160