Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq146010 215 8e-51 >seq146010 Length=1781 Score = 215 bits (238), Expect = 8e-51 Identities = 750/1158 (65%), Gaps = 32/1158 (3%) Strand=Plus/Plus Query 37630 TCATGCAGGCCGATATAGCCGATACTGACAGAAGCGCGTCCATTTTCAAATGCTTTCA-- 37687 ||||| | || || ||||| | | || ||||| |||||||||| ||| ||||| Sbjct 187 TCATGTATTCCAATGTAGCCAAGAGAGATTGAAGCTCGTCCATTTTTGAATA-TTTCAGA 245 Query 37688 --TGATATCGTCATCTGGATTCAGACGTACACCGCAGGCGCCTTCGACGTAAAGAATCGG 37745 | ||||||| ||| || | ||| || || || |||||||| | || | || || Sbjct 246 TATACTATCGTCTTCT---TTTAAACGAACGCCACAAGCGCCTTCCATATATAAGATAGG 302 Query 37746 AGCCACGCTTGCCTTAACGCCACGCAGACGATCAACACGTACCATTAGAGCTTGTTTAAC 37805 || || | || ||||| ||| | |||| | | ||| ||||| |||| |||| Sbjct 303 GGCAACACGAGCTTTAACACCATCTAAACGAGCGATACGATTCATTAATGCTTTTTTACA 362 Query 37806 TACTTCCATACGCTCTTCCAGAAGCTCCCAGAAACGCATATGATTGCCGTTTGCGTCGAG 37865 || | || | |||| | ||||| || | | || || | || || | Sbjct 363 TAAAATTAAGCGGTTATCCAATAATTCCCAAAATTTGCTTTCATCTCCATGGGCTTCAAT 422 Query 37866 TGCGATACGCGGCAGATTCAGAGTAACAACCCCTAGATTATTACGACCTTCGTGAACTTC 37925 ||| || ||||| | || | | | | || |||| |||||| || || || ||||||| Sbjct 423 TGCAATTCGCGGTAAGTTTAAACTTATGACACCTAAATTATTTCGTCCGTCATGAACTTG 482 Query 37926 ATTGCCATTTTCGTCTTCCCAACGATGCAAGAAA-CTGCGGCATCCCATAGGGAACTTAA 37984 ||||||| ||| || | ||| ||||||| || ||||||||||| || || | Sbjct 483 CTTGCCATCTTCCTCATAT--ACGC--CAAGAAAGCTACGGCATCCCATTGGCGTTTTGA 538 Query 37985 AGCTGCCAGTTGTTTCAACAACTTTATCATAACTCAGAATATCTGGATACATACGCTTAG 38044 | || ||| | || |||||||| ||| | | |||||| || |||||||||||| Sbjct 539 ATGAACCCGTTACCGCGACCACTTTATCGTAATTTAAAATATCGGGGTACATACGCTTAC 598 Query 38045 AAGCGCACTCCAGTGCCAGTTGCTTGATACGATAAAGCGGGTCAGTTGGCTTCAAGTTGT 38104 || || || | ||| |||| |||||| |||| ||| ||| || Sbjct 599 TTGCACATTCTAATGCGAGTTTTTTGATATCATAATTGATATCACCAACCTTATGATTAA 658 Query 38105 GTCCGTCTTTCAGAGCAAACACCAGTTTCGGGAACACCGGAGTGATACCCTCTTTGCCAA 38164 || ||||| | |||||||||| ||| || || || | || | | || || | Sbjct 659 CGCCATCTTTTATTGCAAACACCAATTTTGGAAAAACTGCTGTTTTGTGGTTCTTTCCTA 718 Query 38165 GTCCAGCCAGTCGAACTTTCAAGATCGCTTCCTGAATCAGTTCAGCTTCCCAGCTTTCAC 38224 ||| | || | ||| || || | ||| || || ||| | |||||| |||| || Sbjct 719 ATCCTTTTAAACGTATTTTTAAAATAGATTCTTGGATGAGTCGTGATTCCCAACTTTTAC 778 Query 38225 CCAGACCAAAGCCGAATGTACAGAAGGGAGTTTGACCGTTCGCGGAGTGAAGAGTGTTCA 38284 | | |||||||| |||||| || || |||||||| || |||| ||| || ||||||| Sbjct 779 CTAATCCAAAGCCAAATGTAACAAATGGCGTTTGACCATTAGCGGTGTGGAGTGTGTTCA 838 Query 38285 CCTCGTATTCGAGTCCCTGCATTGCATCATACACAG-CTTTGTGAGTC---TTTGCAATA 38340 | ||||| || || || | ||||||||| ||| |||| | ||| ||| | Sbjct 839 CTTCGTACTCAAGAGATTGGAATGCATCATA-ACACTCTTTTTCAGTGCGATTTT---TT 894 Query 38341 GCGTATTCTTTCGCATCTGGAATTTTCCAATAACGGGCTTCGTCCAAATGCTTTTCATGA 38400 || || | | | || | |||| ||| | || | | | ||| |||| || | Sbjct 895 GCATAGTGGTCAGGATTTTTTATTTGCCACTCTGTCGCGACTTGCTTATGTTTTTGATAA 954 Query 38401 GTCATCTTAACATACGGTGCCAGCACTTCGTCAATACGATTAATTGTGTTGCCGCCGTAA 38460 | || ||||| | ||| | | || || |||||||||||||| | || |||||| Sbjct 955 CTGATACTAACAAATTTTGCTAATATCTCATCGATACGATTAATTGTCGTTCCACCGTAA 1014 Query 38461 ATGTGACTTGCTACTTGCGCAATAATCTGAGCGACTACGGCAGCAGCGGTAGAAATGCTT 38520 || || ||||| || || |||||||| ||||| || || | || || | ||| | Sbjct 1015 ATATGGCTTGCCACCTGAGCAATAATTTGAGCCGTGACCGCGGTTGCCGTTGCAATAGAT 1074 Query 38521 TTCGGAGTTTCGATCTGTGCATTTCCCATACGGAACCCGCGATCTAACATGCCTTTGACA 38580 || || | ||| || | || || ||||| || ||| | |||||| | | | Sbjct 1075 TTAGGCGGTTCAATTTCGGCGTTGCCCATTTTAAAACCGTTGGTAAGCATGCCATCTAGA 1134 Query 38581 TCTATCAACATGCAGTTAAACATTGGGAAGAATGGAGAATAGTCAAGATCATGGAAGTGC 38640 || || |||||||| ||||||||||| || ||||| | ||| || | |||||| | || Sbjct 1135 TCGATTAACATGCAATTAAACATTGGAAAAAATGGTGCATAATCCAAATCATGATAATGA 1194 Query 38641 AGCCAGCCTTTTTC--GTGTGCTTG-CATAACTT----CAACAGGAAGATAATGCTTTGC 38693 | || || | | ||||| ||| ||| ||| |||||| ||||| || Sbjct 1195 ATTTCTCCACGGTCATGGGCGCTTGAAATATCTTTTGGCAA----AAGATACTGCTTCGC 1250 Query 38694 AAAGTGCTTACTAACAATACCAGCAACCAGATCGCGTTGAGTAGGGATTACTTTAGCGTC 38753 | | || || ||||| || | ||||| ||||| || |||||||||||| ||| Sbjct 1251 ATAATGACGGGCGACGATACCCGCTAATAGATCCCGTTGTGTTGGGATTACTTTACTGTC 1310 Query 38754 TTTGTTAGCATTCTCATT 38771 ||| |||||||| ||||| Sbjct 1311 TTTATTAGCATTTTCATT 1328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744857118799040