Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_005859.1 Length=121750 Score E Sequences producing significant alignments: (Bits) Value seq146010 107 1e-18 >seq146010 Length=1781 Score = 107 bits (118), Expect = 1e-18 Identities = 308/470 (66%), Gaps = 9/470 (2%) Strand=Plus/Minus Query 54501 ACTGAAAAAGAAGTCTATGATGCTTGTCAGGGTCTAGAGTATGAGATCAATACGATGTTC 54560 ||||||||||| |||||||| | || ||| ||||| || | || || | | Sbjct 884 ACTGAAAAAGAGTGTTATGATGCATTCCAATCTCTTGAGTACGAAGTGAACACACTCCAC 825 Query 54561 AACTCTAATGGTCAGAGTCCATTTATTACTTTTGGTTTTGGTCTAGGAACTTCTTGGGAA 54620 | | |||||||||| | |||||| |||| ||||| ||||| |||| | ||||||| Sbjct 824 ACCGCTAATGGTCAAACGCCATTTGTTACATTTGGCTTTGGATTAGGTAAAAGTTGGGAA 765 Query 54621 GCACGTCTAATACAGAAAGCAATACTGAAAGTACGTATGGATGGCTTAGGCATCAATAAA 54680 |||| || || || || | || | ||| ||||| | | || ||||| | || | Sbjct 764 TCACGACTCATCCAAGAATCTATTTTAAAAATACGTTTAAAAGGATTAGGAAAGAACCAC 705 Query 54681 CGTACAGCTATCTTTCCGAAACTGGTGTTTGTTCTGCGTGATGGCGTAAATATGAAGCCT 54740 ||||| | ||||| ||| ||||||||| | |||||||| ||| ||| | Sbjct 704 AAAACAGCAGTTTTTCCAAAATTGGTGTTTGCAATAAAAGATGGCGTTAATCATAAGGTT 645 Query 54741 GGAGATGTTAATTATGACATCAAGAAGTTAGCTATGAAATGTACTGCTGAACGTATGTAT 54800 || ||| | |||||||| ||||| || | || | ||||| | | | |||||||| Sbjct 644 GGTGATATCAATTATGATATCAAAAAACTCGCATTAGAATGTGCAAGTAAGCGTATGTAC 585 Query 54801 CCAGACTATATCAGCTATGATAAGGTTGTGGAAGTTACTGGTGACTATAAAGTTTCTATG 54860 || || | | | || ||||| || || | || || ||| | ||| | ||| Sbjct 584 CCCGATATTTTAAATTACGATAAAGTGGTCGCGGTAACGGGTTCATTCAAAACGCCAATG 525 Query 54861 GGCTGCCGT-TCATTCTTAGCTGCTA--CAGAAGATGG--TGAAA----CTGCCGGTCGT 54911 || |||||| | ||||| || || |||||||| | || || ||| || Sbjct 524 GGATGCCGTAGCTTTCTTGGCGTATATGAGGAAGATGGCAAGCAAGTTCATGACGGACGA 465 Query 54912 AATAACTTGGGTGTTGTTTCTGTAAACTTGCCTAGAATTGCTATCGAAGC 54961 ||||| || ||||| | | ||||||| || ||||||| || ||||| Sbjct 464 AATAATTTAGGTGTCATAAGTTTAAACTTACCGCGAATTGCAATTGAAGC 415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 388781247207116