Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_005859.1
Length=121750
Score E
Sequences producing significant alignments: (Bits) Value
seq146010 107 1e-18
>seq146010
Length=1781
Score = 107 bits (118), Expect = 1e-18
Identities = 308/470 (66%), Gaps = 9/470 (2%)
Strand=Plus/Minus
Query 54501 ACTGAAAAAGAAGTCTATGATGCTTGTCAGGGTCTAGAGTATGAGATCAATACGATGTTC 54560
||||||||||| |||||||| | || ||| ||||| || | || || | |
Sbjct 884 ACTGAAAAAGAGTGTTATGATGCATTCCAATCTCTTGAGTACGAAGTGAACACACTCCAC 825
Query 54561 AACTCTAATGGTCAGAGTCCATTTATTACTTTTGGTTTTGGTCTAGGAACTTCTTGGGAA 54620
| | |||||||||| | |||||| |||| ||||| ||||| |||| | |||||||
Sbjct 824 ACCGCTAATGGTCAAACGCCATTTGTTACATTTGGCTTTGGATTAGGTAAAAGTTGGGAA 765
Query 54621 GCACGTCTAATACAGAAAGCAATACTGAAAGTACGTATGGATGGCTTAGGCATCAATAAA 54680
|||| || || || || | || | ||| ||||| | | || ||||| | || |
Sbjct 764 TCACGACTCATCCAAGAATCTATTTTAAAAATACGTTTAAAAGGATTAGGAAAGAACCAC 705
Query 54681 CGTACAGCTATCTTTCCGAAACTGGTGTTTGTTCTGCGTGATGGCGTAAATATGAAGCCT 54740
||||| | ||||| ||| ||||||||| | |||||||| ||| ||| |
Sbjct 704 AAAACAGCAGTTTTTCCAAAATTGGTGTTTGCAATAAAAGATGGCGTTAATCATAAGGTT 645
Query 54741 GGAGATGTTAATTATGACATCAAGAAGTTAGCTATGAAATGTACTGCTGAACGTATGTAT 54800
|| ||| | |||||||| ||||| || | || | ||||| | | | ||||||||
Sbjct 644 GGTGATATCAATTATGATATCAAAAAACTCGCATTAGAATGTGCAAGTAAGCGTATGTAC 585
Query 54801 CCAGACTATATCAGCTATGATAAGGTTGTGGAAGTTACTGGTGACTATAAAGTTTCTATG 54860
|| || | | | || ||||| || || | || || ||| | ||| | |||
Sbjct 584 CCCGATATTTTAAATTACGATAAAGTGGTCGCGGTAACGGGTTCATTCAAAACGCCAATG 525
Query 54861 GGCTGCCGT-TCATTCTTAGCTGCTA--CAGAAGATGG--TGAAA----CTGCCGGTCGT 54911
|| |||||| | ||||| || || |||||||| | || || ||| ||
Sbjct 524 GGATGCCGTAGCTTTCTTGGCGTATATGAGGAAGATGGCAAGCAAGTTCATGACGGACGA 465
Query 54912 AATAACTTGGGTGTTGTTTCTGTAAACTTGCCTAGAATTGCTATCGAAGC 54961
||||| || ||||| | | ||||||| || ||||||| || |||||
Sbjct 464 AATAATTTAGGTGTCATAAGTTTAAACTTACCGCGAATTGCAATTGAAGC 415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 388781247207116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |