Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq76857 118 6e-22
seq75000 114 7e-21
seq54391 109 3e-19
seq9439 109 3e-19
>seq76857
Length=1447
Score = 118 bits (130), Expect = 6e-22
Identities = 80/89 (90%), Gaps = 1/89 (1%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||||| |||| |||||||| |||||||||| |||||||||||||||||||||
Sbjct 243 AAAAAAAAATTAAAT-GGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 301
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| ||||||||||||||||||||
Sbjct 302 GACGCTCTAACCAACTGAGCTAATGGGCC 330
Score = 111 bits (122), Expect = 8e-20
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 480 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 539
Query 11516 TGAGCTAATGGGCCG 11530
|||||||||||||||
Sbjct 540 TGAGCTAATGGGCCG 554
>seq75000
Length=5236
Score = 114 bits (126), Expect = 7e-21
Identities = 79/89 (89%), Gaps = 2/89 (2%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||| |||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct 4991 AAAAAAAATTCAA--TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 5048
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| ||||||||||||||||||||
Sbjct 5049 GACGCTCTAACCAACTGAGCTAATGGGCC 5077
>seq54391
Length=1625
Score = 109 bits (120), Expect = 3e-19
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 907 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 966
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 967 TGAGCTAATGGGCC 980
>seq9439
Length=3869
Score = 109 bits (120), Expect = 3e-19
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11457 GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACT 11516
|||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 2903 GGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACT 2844
Query 11517 GAGCTAATGGGCCG 11530
||||||||||||||
Sbjct 2843 GAGCTAATGGGCCG 2830
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261025284458896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |