Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_006565.1 Length=131522 Score E Sequences producing significant alignments: (Bits) Value seq50931 179 3e-40 >seq50931 Length=2692 Score = 179 bits (198), Expect = 3e-40 Identities = 440/662 (66%), Gaps = 15/662 (2%) Strand=Plus/Plus Query 106513 ATCAGATTAAGGGTTGGCCCCAACAAAACTATTATTTATTCTGGTTTGCTATGGGAGCCC 106572 |||| | || |||||||| ||||||| ||||||||||| | ||| | | || || Sbjct 1501 ATCAATTAAAAGGTTGGCCAAAACAAAATTATTATTTATTTTTCTTTAGTTTAGGTTGCC 1560 Query 106573 AAATCATGACGTTGGTTAGTGCTCCTATTACACCGCTAACTTTATTAACATTTATTGGTA 106632 || | ||||| ||||| | ||| || || ||| ||| | | ||||| |||||||| | Sbjct 1561 AAGTTATGACATTGGTAAATGCACCAATCACATGGCTTTCAATCTTAACTTTTATTGGAA 1620 Query 106633 CAACCCTTGGGGTGCTTTGCGTGCTTAGCATAAATGCAGCATCCTCAGTAAATGGCATCC 106692 | || | || || || || || ||| || ||||| || || || ||||| | Sbjct 1621 CTACTTTAGGAGTTCTATGTGTCCTTGCGATTAATGCTGCTAAATCCGTTAATGGTGTTT 1680 Query 106693 TAGGGCTAATCTCAGCTGCGATTT---TCATCTATGTTGGGTTTAAGGCTAAGAATTATT 106749 |||| || | | ||| |||| | || |||||| |||| | |||||||||| Sbjct 1681 TAGGT---ATTTTATCTGGTATTTGTTTTATAGTTGTTGGATTTACTTCAAAGAATTATT 1737 Query 106750 TGAGCATTGGCGAACAGACAGCTTACGTTCTGACTTTGGATCTTCCAGTATTGCTAGCAG 106809 |||| ||||| ||||| | |||||| | || | ||| ||||||| || || || Sbjct 1738 TGAGTATTGGTGAACAAATTGCTTACATAGCCACACTTGATATTCCAGTCTTATTA--AG 1795 Query 106810 TTAAGACGTGGAACTCAGAAACTATTCACAATCTGAGAAAATTTGGAGCTAAGGAATGGG 106869 | |||| ||||| | | || || | | |||||| ||||| |||| Sbjct 1796 T-AAGAATTGGAATGTTAATATGGTTTCTAAAATTCGTAAATTTACTGCTAAAAGTTGGG 1854 Query 106870 TTATTTCCAT---CTTAGGAACAATTGCTGTATACGCTATTTCTGGCTATTTGATTGGCG 106926 | |||||||| ||| || | | ||| || | || || | | ||| | Sbjct 1855 TAATTTCCATTGCCTTTACTGCAGTCG---TATTCGTTGGATCAGGTTTTGCTATTCAAG 1911 Query 106927 CGCTAACTGATGACCCTCGGCCTTGGATTGATGCGATTGCATTTTCAATTAGTTTAACTG 106986 | |||||||||| ||| || | |||||| || || | || ||||||||| Sbjct 1912 CATTAACTGATGATGGTCGTCCATTCTATGATGCCTTTAGTTTCGCTGTTTGTTTAACTG 1971 Query 106987 CTGGTATTATGTGCTTTATGCGGTATAATAACCAATATTACTGGTGGGTGGCAAGTGGCT 107046 |||| ||||| || || ||| | || || || ||||| | ||||||| | ||| || Sbjct 1972 CTGGAATTATTTGTTTCATGAGATACAACAATCAATACTTCTGGTGGTTAGCATCGGGAC 2031 Query 107047 TAGCACAAATGGTATTGTGGTATGTCTCCTTCAAGCAAGGAAGTGCCACACTAGCAATGT 107106 |||| ||| | ||||| |||| | | | |||||| |||| ||| || ||||||||| Sbjct 2032 TAGCTCAATTAGTATTATGGTTTATTACTTTCAAGGAAGGTTCTGCTACTTTAGCAATGT 2091 Query 107107 TTATTAATAGTTCTGTTTATCTTGCTAATGATGTATTAGCATTCACCGTTTCTCCATGGT 107166 || | || ||| | ||||| |||| |||||||| |||||||| || |||||| |||| Sbjct 2092 TTGTAAACAGTGCAATTTATGTTGCAAATGATGTTTTAGCATTTACTACTTCTCCTTGGT 2151 Query 107167 TC 107168 || Sbjct 2152 TC 2153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419995930741948