Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq115990 185 1e-42 >seq115990 Length=2191 Score = 185 bits (204), Expect = 1e-42 Identities = 204/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | ||||| ||||| || ||||| || || ||||||||||| Sbjct 872 GCAAAGCGTCATCGAAAAGTGCTTCGTGATAATATTCAAGGTATTACAAAGCCAGCTATT 813 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| | |||||||||||||| || || ||| | || ||||| | |||||||| | | Sbjct 812 CGTCGCTTAGCTCGTCGTGGTGGTGTTAAACGTATTTCAGGATTAATATATGAAGAAACT 753 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 |||| ||| | || | || || | | || || | ||||||| || || ||||| || Sbjct 752 CGTGGTGTGCTTAAAGTATTTCTTGAAAATGTAATTCGTGATGCTGTTACA-TATACTGA 694 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| |||||| | ||||| || || |||||||| | || |||||||| ||||||||||| Sbjct 693 GCATGCTAAAAGAAAGACAGTTACTGCCATGGATGTTGTATATGCATTAAAACGTCAAGG 634 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 |||| | ||||||||||| |||||| Sbjct 633 TCGTACCTTATATGGTTTTGGTGGTTAAT 605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78941531973828