Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq119451 105 1e-18 seq117667 86.0 1e-12 seq14986 82.4 1e-11 >seq119451 Length=7326 Score = 105 bits (116), Expect = 1e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 7256 TGAATGAGTTGTATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCA 7315 ||||| |||| | | ||| || | ||| |||||||||| || || ||||| |||| | Sbjct 6534 TGAATTTGTTGAAAGACATATCAGAATTCACATGATCATTGTATATGTGCTTACGATTAA 6475 Query 7316 TTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTA 7375 |||||||| || | | | | ||||||||||||| ||||| ||||| || | Sbjct 6474 GCTCATCTTGTTTAAATAAGATTATGTAATTTGCATTATCTCGAATCAAATGCTTTGGGA 6415 Query 7376 TTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGA 7435 | ||||||| | |||||| | | || || || ||| | ||||| |||||||| |||| Sbjct 6414 TGTGTGTATAGGATTGACACAAGTTAAAACTATCTACACCATTGTGACGACCCATACAGA 6355 Query 7436 AAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACATCGTCAAA 7481 || | | |||| || ||| || ||||| || ||||| |||| Sbjct 6354 AATATTCGCGAATGTTATTCTGCTTATCACAGGCCACATCAGCAAA 6309 >seq117667 Length=1851 Score = 86.0 bits (94), Expect = 1e-12 Identities = 192/288 (67%), Gaps = 3/288 (1%) Strand=Plus/Plus Query 7940 AACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGT 7999 ||||||||||| || || || |||| ||| ||||| || || | ||||| || Sbjct 718 AACAATATAATAGACTCTCTACCTTTTGAGGCTCATATACCTGGATACAATTACTGTGGA 777 Query 8000 CCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCTTTGGAC 8059 || || |||||||||| || ||||||| || |||||| || || ||| |||||| Sbjct 778 CCTGGAACAAAGTTAGAGAAACGATTAGCACGTGGTGATCGTGGAATTAATGGTTTGGAT 837 Query 8060 GCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTTGGAAGCTCGT 8119 | ||||||| || || ||||| || || ||||| | || || | ||| | ||| Sbjct 838 GAAGCGTGTAGAGAGCATGATATTGCATATTCAAACA---GTAAAGAGTTGAGTGAACGT 894 Query 8120 CACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGCGAGAGACGCT 8179 || | ||||| | || | ||| || || ||| | || | ||||| |||| | Sbjct 895 CATAAAGCTGACTCAGTTTTAATTGAAAAGGCTTGGAATCGTGTAAAAGCGTTAGACAGT 954 Query 8180 GCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAAG 8227 |||||| || | ||| || || | ||||| || || |||||| Sbjct 955 AGTATTGGAGAGAGAGCAGCAGCATACTTTGTAACAAACATGATGAAG 1002 >seq14986 Length=5428 Score = 82.4 bits (90), Expect = 1e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 6187 TCTTCAATAATTGACATGATTTCATTCGTGTGACTTGGGTTTCCAGCAGCTTGAGATGCC 6246 |||||||| || |||||||||||||| | |||| | || ||||| | ||| |||| Sbjct 5390 TCTTCAATGATAGACATGATTTCATTGTTATGACACGTGTGACCAGCTGATTGTGATGTA 5331 Query 6247 ATCAGTAGTCGCAAACGATCAACTAGCTCATTTGGATCATCCCAGTAAAC 6296 |||| |||| ||| || || ||||| |||||| ||| |||||| | ||| Sbjct 5330 ATCAAAAGTCACAATCGGTCGACTAGTTCATTTAGATTATCCCAATGAAC 5281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97804308848584