Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq119451 105 1e-18
seq117667 86.0 1e-12
seq14986 82.4 1e-11
>seq119451
Length=7326
Score = 105 bits (116), Expect = 1e-18
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 7256 TGAATGAGTTGTATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCA 7315
||||| |||| | | ||| || | ||| |||||||||| || || ||||| |||| |
Sbjct 6534 TGAATTTGTTGAAAGACATATCAGAATTCACATGATCATTGTATATGTGCTTACGATTAA 6475
Query 7316 TTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTA 7375
|||||||| || | | | | ||||||||||||| ||||| ||||| || |
Sbjct 6474 GCTCATCTTGTTTAAATAAGATTATGTAATTTGCATTATCTCGAATCAAATGCTTTGGGA 6415
Query 7376 TTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGA 7435
| ||||||| | |||||| | | || || || ||| | ||||| |||||||| ||||
Sbjct 6414 TGTGTGTATAGGATTGACACAAGTTAAAACTATCTACACCATTGTGACGACCCATACAGA 6355
Query 7436 AAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACATCGTCAAA 7481
|| | | |||| || ||| || ||||| || ||||| ||||
Sbjct 6354 AATATTCGCGAATGTTATTCTGCTTATCACAGGCCACATCAGCAAA 6309
>seq117667
Length=1851
Score = 86.0 bits (94), Expect = 1e-12
Identities = 192/288 (67%), Gaps = 3/288 (1%)
Strand=Plus/Plus
Query 7940 AACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGT 7999
||||||||||| || || || |||| ||| ||||| || || | ||||| ||
Sbjct 718 AACAATATAATAGACTCTCTACCTTTTGAGGCTCATATACCTGGATACAATTACTGTGGA 777
Query 8000 CCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCTTTGGAC 8059
|| || |||||||||| || ||||||| || |||||| || || ||| ||||||
Sbjct 778 CCTGGAACAAAGTTAGAGAAACGATTAGCACGTGGTGATCGTGGAATTAATGGTTTGGAT 837
Query 8060 GCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTTGGAAGCTCGT 8119
| ||||||| || || ||||| || || ||||| | || || | ||| | |||
Sbjct 838 GAAGCGTGTAGAGAGCATGATATTGCATATTCAAACA---GTAAAGAGTTGAGTGAACGT 894
Query 8120 CACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGCGAGAGACGCT 8179
|| | ||||| | || | ||| || || ||| | || | ||||| |||| |
Sbjct 895 CATAAAGCTGACTCAGTTTTAATTGAAAAGGCTTGGAATCGTGTAAAAGCGTTAGACAGT 954
Query 8180 GCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAAG 8227
|||||| || | ||| || || | ||||| || || ||||||
Sbjct 955 AGTATTGGAGAGAGAGCAGCAGCATACTTTGTAACAAACATGATGAAG 1002
>seq14986
Length=5428
Score = 82.4 bits (90), Expect = 1e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 6187 TCTTCAATAATTGACATGATTTCATTCGTGTGACTTGGGTTTCCAGCAGCTTGAGATGCC 6246
|||||||| || |||||||||||||| | |||| | || ||||| | ||| ||||
Sbjct 5390 TCTTCAATGATAGACATGATTTCATTGTTATGACACGTGTGACCAGCTGATTGTGATGTA 5331
Query 6247 ATCAGTAGTCGCAAACGATCAACTAGCTCATTTGGATCATCCCAGTAAAC 6296
|||| |||| ||| || || ||||| |||||| ||| |||||| | |||
Sbjct 5330 ATCAAAAGTCACAATCGGTCGACTAGTTCATTTAGATTATCCCAATGAAC 5281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97804308848584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |