Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq25219 123 3e-23 >seq25219 Length=1370 Score = 123 bits (136), Expect = 3e-23 Identities = 224/326 (69%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 21311 TCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACA 21370 || ||||||||||| ||||||||| |||| | ||| || ||||| ||||| | || || Sbjct 558 TCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAGTTCATTCCGATAAGATTGACG 499 Query 21371 GGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATT 21430 || ||||| | ||| || || || || || ||| |||||| | || || | ||| Sbjct 498 GGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACTGCTTCAGCGATGATGTCTATG 439 Query 21431 ATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAA 21490 || | | || || | || || || || ||||||| ||| || || || ||| Sbjct 438 ATGCGTTCCTTGCTTGGTTTCTGCACCAAATGCTTGAACATCAGACAAGCGAAGTCGCAA 379 Query 21491 TGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCT 21550 || | || || || | || | || || || ||||| | ||||||||| | || Sbjct 378 TGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGACCGGGCATGAGACCG 319 Query 21551 CTCTTTTTTAACCAAAATATTGACGCAAA--TGCTCCTGAAAAGAAAATGCCCTCAACGG 21608 | ||| || | ||| || ||||| || || ||| ||||| |||||| || ||||| | Sbjct 318 CGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTGAA--GAAAATCCCTTCAACTG 261 Query 21609 CAGCAAATGCAACTAATCGTTCACCG 21634 |||||||||||| | ||||||||| Sbjct 260 CAGCAAATGCAATGATACGTTCACCG 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530928777883040