Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq79726 399 3e-106 >seq79726 Length=8148 Score = 399 bits (442), Expect = 3e-106 Identities = 999/1509 (66%), Gaps = 24/1509 (2%) Strand=Plus/Plus Query 61840 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 61899 |||||||| ||||| || || | | | ||| || || || ||||| |||||||| || Sbjct 3806 CTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCC 3865 Query 61900 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 61959 || || || || |||| ||| | || || || || | ||| || |||| Sbjct 3866 AGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCGG 3925 Query 61960 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62019 || || | ||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct 3926 TTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGC 3985 Query 62020 CATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62078 |||||| || ||| | | || ||||| | ||| || || | ||| | || | Sbjct 3986 CATTTTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCAC-GGATTT 4044 Query 62079 CTTCTGGAA---GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62135 ||| ||||| | | | | ||| || ||||| | | ||| || || |||||| | Sbjct 4045 CTTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTCA 4104 Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195 | ||||| | ||| || | ||| || | | | |||| || || |||| || | || Sbjct 4105 TGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATTT 4164 Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255 | || || ||||||| || | || |||| || || || ||||| || | || | Sbjct 4165 GGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGATT 4224 Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62315 | || || || | ||||| || || || || |||||||| || || | || | | Sbjct 4225 CGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAGT 4284 Query 62316 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62375 | |||| ||||| | ||||| || || |||| |||||| ||| ||||| | | Sbjct 4285 TCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGTTG 4344 Query 62376 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATAT 62434 || | || || || || ||||| | | || | ||| |||| Sbjct 4345 GTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCT-CATAG 4403 Query 62435 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62494 || ||||||||||| |||||| || |||||||| || ||||||| ||| || || || Sbjct 4404 GTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAG 4463 Query 62495 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTT 62554 |||||||||||||| | | || ||| ||||| || ||| || ||||||| Sbjct 4464 ATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCGC 4523 Query 62555 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62614 | ||||| | ||||| || |||||||||||||| || ||||| || | |||| | Sbjct 4524 ATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTG 4583 Query 62615 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62674 || || | | || ||||| || || || |||| | || || ||||| || | || Sbjct 4584 TTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTG 4643 Query 62675 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---T 62728 | | ||||| ||||| || | ||||| || | ||||| | | ||| Sbjct 4644 CGGGTCACAAT--CTTTG-TGACTTGCTTCAACTTCTGGAAATCGTACTTCTTATCGGGA 4700 Query 62729 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 62788 | || |||||||||| |||| || |||| || ||||| || | ||||| | | Sbjct 4701 GTGACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCG 4760 Query 62789 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 62848 | || | | |||||||||||||||||||| ||||||||||| || | || |||||| Sbjct 4761 GAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGA 4820 Query 62849 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 62908 || ||| ||| || ||||| || || || ||| | ||||| || || || | ||| Sbjct 4821 TTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGA 4880 Query 62909 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTT--- 62965 ||||||||||| || ||| | | | || | | | || | ||| | |||| Sbjct 4881 GATTCTATAATGGCAAACCAAAGCGTTTGTGC---TTTCACAGTTCTGTTTGCCTTTCCC 4937 Query 62966 TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCA 63025 || | ||||| | || |||| ||||||| || ||||| || | | || || Sbjct 4938 TCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACCG 4997 Query 63026 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63085 || || | || || |||||||| ||||| || ||||| | | |||||| ||||| || Sbjct 4998 GGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAAC 5057 Query 63086 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 63144 ||||| |||||||| ||||| ||| || | ||| | | ||| | ||||| ||||| || Sbjct 5058 AGATCGGGAATCCATAGAGC-ATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGGT 5116 Query 63145 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63204 ||||| || | ||| | |||| | | || || |||||||| || |||||||| ||||| Sbjct 5117 GTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGGC 5176 Query 63205 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63264 | | || || || ||| ||||| || || | || | |||| ||| || | | Sbjct 5177 GAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTGAACCC 5236 Query 63265 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACT 63324 ||||| |||||||| || || || || ||||| || || || | ||| | |||| | Sbjct 5237 TCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCCAGCAATACCGGTTCCCTT 5296 Query 63325 GGCACGAAT 63333 ||| | ||| Sbjct 5297 GGCCCTAAT 5305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632474069201600