Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq79726 223 3e-53 >seq79726 Length=8148 Score = 223 bits (246), Expect = 3e-53 Identities = 1011/1577 (64%), Gaps = 48/1577 (3%) Strand=Plus/Plus Query 128778 CTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCC 128837 ||||||||| || || | || || | ||||||||||| ||||| | ||||||||||| Sbjct 3806 CTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCC 3865 Query 128838 TGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGG 128897 || || | || ||||| | | |||||||| ||||| | ||||| | || Sbjct 3866 AGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCGG 3925 Query 128898 TTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957 || | || | ||| || || |||||||||||||| || || | ||| | ||||||||| Sbjct 3926 TTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGC 3985 Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017 ||| ||| ||| || |||||||| || ||||| ||||| | | | Sbjct 3986 CATTTTAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCACGGATTTC 4045 Query 129018 TTTTGGTATTTCTTCAATGTTCTGCA-CGCTGC-CGTTGTTTGCAATAATTTTGTTTCGC 129075 || ||| ||| || || | ||| | | | | ||||| ||| || |||| || | Sbjct 4046 TTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTG--TGCGATGATTTCATTCTTC 4103 Query 129076 ATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT--- 129132 || | |||| |||| | || | | | ||| | ||||| |||| ||| Sbjct 4104 ATGTCATCGTCCCACAAGTCCAACTCAGTGAGATC----CTTAAGTAGGTGTTGATTGAC 4159 Query 129133 -ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAA 129191 | ||| || || || | || || |||| ||| ||||| ||| |||||||||| Sbjct 4160 GATTTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAA 4219 Query 129192 CGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAG 129251 |||||| |||||||| | ||||| || || | || || ||||| ||| | || Sbjct 4220 CGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAG 4279 Query 129252 CGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGA 129311 |||||| | | |||||||| ||| | | || | | ||| ||||||| || Sbjct 4280 CGAGTTCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCACA--GA 4337 Query 129312 T--GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAA 129369 | || ||| | ||||||| |||||| || | ||| ||| ||| |||||| Sbjct 4338 TCAGTTGGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCC 4397 Query 129370 AAGTAGGAATCGTGCACGCCGTAAGCTTTT--GCCAATTCGCAACTCGCTTCCAATGCGC 129427 |||| |||| | | |||||| | |||| ||| || || || || | ||| | Sbjct 4398 TCATAGGTTTCGT--ATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTC 4455 Query 129428 CAAAATAAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGGTCGCTTTCGTACG 129487 || | || || |||||| |||| ||| | | || | || ||||| ||||| | Sbjct 4456 CATAGTAGATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATG 4515 Query 129488 GCATA-CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGA 129546 | ||| |||| || | || |||||| || ||||||| ||| | ||||| || || Sbjct 4516 G-ATAGCGCATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGG 4574 Query 129547 TGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTG 129606 ||| | | || ||||| | ||| || || ||| | |||| ||| || |||||| Sbjct 4575 TGTCGTGTGTTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTG 4634 Query 129607 TTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCT 129666 || || || | |||||| || || || | || ||| | | |||| ||||| || Sbjct 4635 TTCAAGTTGCGGGTCACAATCTTTGTGACTTGCTTCAACTTCTGGAAATCGTACT--TCT 4692 Query 129667 ACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCG 129726 |||| ||| || || | ||| || ||||| ||||| || ||| | || Sbjct 4693 -TATCGGGAGTGACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCA 4751 Query 129727 TTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAA 129786 | | |||||||||||| || | ||| | |||||| || |||||||| | Sbjct 4752 TCCGGTGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATG 4811 Query 129787 TGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTT 129846 | || |||||| || |||||||||||||||||| | ||||||||| || || || Sbjct 4812 TTCTGTTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTC 4871 Query 129847 TCGACTTGCGTTTCGACAATGGTCCTGAACAAGTC--TCGAGCCTT----GATCTGTCTT 129900 || ||||| | ||| | ||||| | | ||| | | | || || | ||||| || Sbjct 4872 TCCACTTGAGATTCTATAATGG--CAAACCAAAGCGTTTGTGCTTTCACAGTTCTGT-TT 4928 Query 129901 ACAAATTTGCCACATTTCTCGTATGCCACATACAGTTGTTC-AAATTCTGAGCCGTGTAC 129959 | ||| || | |||||||| ||||| | || || |||| || | || Sbjct 4929 GC--CTTTCCCTC-CTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAG-AC 4984 Query 129960 GGTGTCGAGCAA--CGGCG-ATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTC 130016 || |||| ||| | | | | | || ||||||||| ||| || || ||||| Sbjct 4985 ---TTCATGCAAACCGGGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTC 5041 Query 130017 GACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCT 130076 ||||| ||||| |||| |||||| | ||| || || || |||||||| || ||| | | Sbjct 5042 CACTCGCTTCATGAACAGATCGGGAATCCATAGAGCATAGAACAAATCGCGAGCTCTGTT 5101 Query 130077 ATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGG 130136 ||||| || |||| |||| || | ||| || | ||||| | ||||| || Sbjct 5102 CTCCTCCTTTCCGGTGTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGG 5161 Query 130137 TTCAACATAAATTGCCATTGCGCCCTTCCGTTT---GCCCCCTTGGTCAACGTGGCGCAC 130193 || | ||||| || | || || || || ||| |||||||| || | || | Sbjct 5162 CTCCAAGTAAATGGCGAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGC 5221 Query 130194 GGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTC 130253 | | |||||| | ||| || ||||| | | ||||| | || |||||||| | | Sbjct 5222 GACGTTGTTGAACCCTCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCCAGC 5281 Query 130254 AATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTT 130313 ||| | || |||| || | || || | | || ||||| || || | || Sbjct 5282 AATACCGGTTCCCTTGGCCCTAATGCAGTGCACATTGATGCCAATGCCTCCCGCAGACTT 5341 Query 130314 TGATATCAACGCGCAAT 130330 |||||||| ||||||| Sbjct 5342 TGATATCATGGCGCAAT 5358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418980143864740