Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq79726 286 7e-72 seq25219 105 1e-17 >seq79726 Length=8148 Score = 286 bits (316), Expect = 7e-72 Identities = 594/877 (68%), Gaps = 23/877 (3%) Strand=Plus/Plus Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 ||||||||| |||| || | ||||| || ||||| | ||||| ||||| ||| || Sbjct 4355 CCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCTCATAGGTTTCGTATGG 4414 Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAA 244419 || || |||||| | |||||| | || || || | ||||||||||| ||||| Sbjct 4415 TCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAA 4474 Query 244420 GATCATCTTGTTCAT--GTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATG 244477 ||| | ||| | || ||| || | | || | || || ||||| ||| Sbjct 4475 GATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGT--ATGGATAGCGCATCAGAATG 4532 Query 244478 AAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGC 244537 | ||||||| | ||| || || ||||| ||||| || | |||||| |||| || | Sbjct 4533 AGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTC 4592 Query 244538 ATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATC 244597 | || || |||| ||||| || ||| |||| || | ||||| | ||||||||| | Sbjct 4593 TTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACA 4652 Query 244598 ATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACT-CGTAGGGATCCTCGGCGATGGT 244656 || ||| | || | ||| || ||||||| | || |||| || || Sbjct 4653 ATCTTTGTGACTTGCTTCAACTTCTGGAAATCGTACTTCTTA-------TCGG-GA--GT 4702 Query 244657 GATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGA 244716 || | ||| ||| || || | | |||| |||||| || || | ||| |||| Sbjct 4703 GA------CGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGG 4756 Query 244717 GTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTG 244776 || ||||| ||||||||| ||||| || |||||||||||||||||||| | || ||| Sbjct 4757 TGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTG 4816 Query 244777 GTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAG 244836 |||||||||||| |||||| || || |||||||||||| | || |||||||| | Sbjct 4817 TTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCAC 4876 Query 244837 CTGGGCGACGAGGACGCTGTTCCAGAG-GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGC 244895 || | | | | | ||| || || | || || || || ||| ||||| | Sbjct 4877 TTGAGATTCTATAATGGCAAACCAAAGCGTTTGT-GCTTTCACAGTTCTGTTTGCCTTTC 4935 Query 244896 CCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGC 244955 |||| |||||| ||||||||||| ||||||||| |||||||| || | | | Sbjct 4936 CCTCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAAC 4995 Query 244956 CGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGA 245015 |||||||| |||||||| | | ||| |||||| || | | || | || ||||| Sbjct 4996 CGGGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGA 5055 Query 245016 AGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAG 245075 | || ||||| ||||| || || | ||| | || | | || | ||| ||| || | Sbjct 5056 ACAGATCGGGAATCCATAGAGCATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGG 5115 Query 245076 TGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAG 245135 |||||||| ||| ||||| || ||||||| ||| ||||||||||||| ||| | | Sbjct 5116 TGTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGG 5175 Query 245136 CGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 ||| ||| || || |||||| |||||| ||||| || Sbjct 5176 CGAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGAC 5212 >seq25219 Length=1370 Score = 105 bits (116), Expect = 1e-17 Identities = 283/427 (66%), Gaps = 13/427 (3%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||||| || || || || | || || | ||||||||||| |||||||| || Sbjct 149 CTTTTCAATGCAATTGAAACACTCCCATGTGTGAAGAAGAAGGCTGACTGGGCACTTGCA 208 Query 42669 TGGATCG--AG--AGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGT 42724 |||||| || ||||| |||| ||||| || | | | || ||| | || || Sbjct 209 TGGATCTCAAGCAAGTCC----GCAAACTTCGGTGAACGTATCATTGCATTTGCTGCAGT 264 Query 42725 CGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGT 42783 || || || |||||| ||| |||||| || ||||||||||| ||| || ||| | Sbjct 265 TGAAGGGATTTTCTTCAGCGGCAGCTTCGCATCAATCTTCTGGCTGAAGAAGCGCGGTCT 324 Query 42784 CGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGG 42843 | |||||||| || || ||||| ||||| || || | |||||||| || ||| | | Sbjct 325 C-ATGCCCGGTCTTACATTCTCCAACGAGCTGATTTCACGCGACGAGGGACTCCATTGCG 383 Query 42844 ACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCC 42903 |||| || || || ||||| | || | ||| || || ||||| || || Sbjct 384 ACTTCGCTTGTCTGATGTTC---AAGCATTTGGTGCAGAAACCAAGCAAGGAACGCATCA 440 Query 42904 GGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCG 42963 | ||||||| | || || || |||| ||| | || ||| | || | | ||||||| Sbjct 441 TAGACATCATCGCTGAAGCAGTCAAGATTGAGCAAGAATTCTTAACAGACGCTCTGCCCG 500 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 | || |||| |||||| ||| || |||| | || || | | || ||||||| Sbjct 501 TCAATCTTATCGGAATGAACTGCGAACTTATGTCTCAATATATTGAATTTGTAGCCGACC 560 Query 43024 ATCTCCT 43030 ||| || Sbjct 561 GTCTGCT 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942613467328960