Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq21678 132 4e-26 seq73487 111 1e-19 >seq21678 Length=5369 Score = 132 bits (146), Expect = 4e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 6871 TCAGCAAAAGAGTGGATTGCACAACGTGAATCTAGTGGTTCTTATGATGCAACAAATGGT 6930 || || ||||| ||||||||| | ||||| |||||||| |||| ||| ||||||| Sbjct 1718 TCTGCTAAAGATTGGATTGCATCTCACGAATCAAGTGGTTCATATGGAGCATCAAATGGA 1659 Query 6931 CAGTATATTGGTCGTTACCAATTATCTGCCTCTTATTTAAATGGTGACTATTCACCTGCC 6990 || ||| |||| || ||| |||| ||| ||||| || |||||||| | || Sbjct 1658 CAATATTATGGTAAATATCAAATATCCAAAGCTTCATTAAACGGGGACTATTCTGCAGCT 1599 Query 6991 AACCAAGAACGAGTAGCTGATGAGTATGTAGCAGGTCGCTATGGCTCATGGGAGAACGCA 7050 ||||||||| || ||||||| | ||||| | || ||||| |||||||| || || Sbjct 1598 AACCAAGAAAGAACAGCTGATCAATATGTTCAATCACGTTATGGTTCATGGGACAATGCT 1539 Query 7051 AAATCTTTCTGGTTAGCAAATGGTTGGTACTAA 7083 |||||||||||| | |||||||||||| ||| Sbjct 1538 AAATCTTTCTGGCAACAAAATGGTTGGTATTAA 1506 >seq73487 Length=2939 Score = 111 bits (122), Expect = 1e-19 Identities = 184/263 (70%), Gaps = 12/263 (5%) Strand=Plus/Minus Query 131603 AGGGACACGTGTGTCCAACCAAAATTGCTCAGTAAGCTTTTTCCATGTGGCTTGGTCAAT 131662 ||| | ||| || || ||||||||||| ||||| | |||| ||| || |||| ||||| Sbjct 2310 AGGAATACGGGTATCTAACCAAAATTGTTCAGTTAATTTTTCCCAAGTTGCTTTATCAAT 2251 Query 131663 TACATCATCAATCTTATTCCAGTTAATTCCTTCATACTTTTCTTGCAAATTCATGTGCTC 131722 | |||| || |||||| || ||| ||| ||| || || || || | |||| Sbjct 2250 TTGATCACTAACAGCATTCCAATTGATTGCTTTATAATTATC---CATCTTACTTAGCTC 2194 Query 131723 ATCTCCTTAA-----ATTGTACAACTTTCACACTCTGAAACCCCTACTTCGCTTCCGTCT 131777 | | ||||| |||| |||||||||||||| ||| || ||||| | || Sbjct 2193 CT-TACTTAAATTAGATTGAGCAACTTTCACACTCATTAACACCAACTTC---TTGGTTA 2138 Query 131778 TCTTCGGTGAATGTTCTAACATAATAAATTGTTTTTATACCTTTTTTCCATGCATAATGT 131837 || || ||| ||||||| |||||||| | || ||||||||| || |||||||| | Sbjct 2137 TCATCAGTGTATGTTCTTACATAATACAATGATTTTATACCCATTGCATGTGCATAATTT 2078 Query 131838 CTTAATAAAGTTAAGTCCCGAGT 131860 ||||| | | |||| || ||||| Sbjct 2077 CTTAAAATATTTAAATCACGAGT 2055 Score = 89.7 bits (98), Expect = 5e-13 Identities = 170/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 131998 TATCATACGCTGACTTGTAATATGGAATTGTCTTCTCAGATAAACGAGGCGCAGGGTAAT 132057 ||||||| ||||| ||||||||| | ||| | | |||||| || |||||||||| Sbjct 1639 TATCATATGCTGATTTGTAATATTTTAATGTTTCATTAGATAAGTATGGAGCAGGGTAAT 1580 Query 132058 AAGTTTTACCTGTTTTACCATCTTGACGTTCTTCAATCATAGAGATAATTGGGTGCAGTG 132117 | ||||||| || || || | | |||||||| || ||||| || || || Sbjct 1579 AGATTTTACCAGTCTTGGATTCATATCTTTCTTCAACTTTACTAATAATAGGATGAAGAC 1520 Query 132118 AAGAGGTAGTCTCATTAACATAGGCAATACTACCATTCGGAGCCACGGCTAAACGGTTTT 132177 || || | ||||||| || | ||| |||||| ||||| || ||||| | ||||| Sbjct 1519 TAGCTGTTGAATCATTAATGTATGAAATGGAACCATTAGGAGCAACTGCTAATCTGTTTT 1460 Query 132178 GGTGGTATAGACCA-CTTTCAATAATGCTG-TTTC-TTAATGTTTCCCAATCTTTTACAT 132234 | || || | |||| ||||| |||| | | |||| ||||| | |||||| ||| ||| Sbjct 1459 GATGATAGATACCATCTTTC-ATAA--CAGATTTCTTTAATTCATTCCAATCATTTTCAT 1403 Query 132235 TAGG 132238 | || Sbjct 1402 TTGG 1399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453671819589120