Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq145875 172 2e-38 >seq145875 Length=1531 Score = 172 bits (190), Expect = 2e-38 Identities = 296/427 (69%), Gaps = 2/427 (0%) Strand=Plus/Plus Query 51862 TTACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTCTTTGGTCA 51921 ||||| ||| || |||||| | ||| ||||| | ||| || ||||| |||| || Sbjct 978 TTACAGTACTTTCTCACAAGTACACAATGACCAACTGAAAGAACCGATGTTTCTTGGACA 1037 Query 51922 GAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAGTTAATTGA 51981 ||||| ||||| || ||||| ||||| || || | || || || || ||||||| Sbjct 1038 ATCGGTTAATGTTGCGCGTTATGATCAACAAAAATATGAAATTTTTGAAAAACTAATTGA 1097 Query 51982 GAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGACCGTATTGA 52041 || || || || || || ||||| || ||||| || || |||| || || || || || Sbjct 1098 AAAGCAGTTATCTTTTTTTTGGCGGCCAGAAGAAGTGGATATTTCACAAGATCGAATCGA 1157 Query 52042 TTAT-CAGAAGCTACCTGCAAACGAACAACACATTTTCACCAGTAATCTTCGTTATCAGA 52100 |||| | | | || |||| | | ||| |||| ||||| | |||||| | ||||| | Sbjct 1158 TTATGCTGGA-CTTCCTGAACATGAAAAACATATTTTTATCAGTAACTTAAAATATCAAA 1216 Query 52101 TTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACACAGTTTTGCTTCCAATCGTGAGCA 52160 | | || || || ||||| ||||| | || || | ||||| || | | | Sbjct 1217 CTTTACTGGATTCGATTCAAGGACGCAGTCCGAATGTCGCATTGCTCCCTTTAATTTCAA 1276 Query 52161 TTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGACTATTCATTCACGTT 52220 | ||||| | || || ||| ||||||| ||||| || || || ||||| || || || | Sbjct 1277 TACCTGAGCTTGAAACTTGGGTTGAAACGTGGTCATTTTCAGAAACTATCCACTCGCGAT 1336 Query 52221 CTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCATTATCTTTGATGAAATCG 52280 |||||||||| || |||||||| || || | || ||| ||| |||||||||| || | Sbjct 1337 CTTATACCCATATTATTCGTAACATCGTCAATGATCCATCGATTGTCTTTGATGATATTG 1396 Query 52281 TAACTAA 52287 | || || Sbjct 1397 TGACAAA 1403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169104311249224