Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq20420 93.3 5e-14
seq34142 86.0 7e-12
seq5336 82.4 8e-11
seq75 82.4 8e-11
>seq20420
Length=11055
Score = 93.3 bits (102), Expect = 5e-14
Identities = 77/93 (83%), Gaps = 1/93 (1%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1737 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1678
Query 57067 TACTACCGAGGAT-TGAATATATAACTTGAATA 57098
||||| ||||||| ||| | ||||| || ||||
Sbjct 1677 TACTATCGAGGATGTGATTTTATAAGTTAAATA 1645
>seq34142
Length=1455
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 808 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 867
Query 57067 TACTACCGAGGATTG 57081
||||| |||||||||
Sbjct 868 TACTATCGAGGATTG 882
>seq5336
Length=1527
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 963 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 904
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 903 TACTATCGAGGAT 891
>seq75
Length=1704
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 698 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 757
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 758 TACTATCGAGGAT 770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542220105768640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |