Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq79726 172 5e-38 >seq79726 Length=8148 Score = 172 bits (190), Expect = 5e-38 Identities = 862/1361 (63%), Gaps = 33/1361 (2%) Strand=Plus/Minus Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || ||||| | ||||| || || || |||| ||| ||| | | | |||| ||| || Sbjct 5347 ATATCAAAGTCTGCGGGAGGCATTGGCATCAATGTGCACTGCATTAGGGCCAAGGGAACC 5288 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || || || || ||||| |||||||| || || ||||| | | |||||| Sbjct 5287 GGTATTGCTGGAACAAACGGTACCTCAAACGGCCTTGTTCCAATGCTGAGAGGGTTCAAC 5228 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 |||| || || || || ||||| || || || | | | ||| | ||||| | || Sbjct 5227 AACGTCGCTCGGTATGTCGACCAAGGAGGCGGCAAGCGACCAGGTGCCTTCGCCATTTAC 5168 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 | ||||||||||| ||||| | | ||| | || || |||||| ||| || Sbjct 5167 TTGGAGCCCTGGCATTCGGACATCTTTGAGTTCTTGGATTTGAAGAAGAACACCGGAAAG 5108 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | || || | || | ||||| ||||| ||| | || || || || ||||| Sbjct 5107 GAGGAGAACAGAGCTCGCGATTTGTTCTATGCTCTATGGATTCCCGATCTGTTCATGAAG 5048 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGT-CCCA-ATGAATGTCCCGGACTGT 94369 || || || || || |||| ||||| ||| |||| || | || ||||| || Sbjct 5047 CGAGTGGAAGCCGACGGCGACTGG--TCTTTGATGTGCCCACATAAGTGCCCCGGTTTGC 4990 Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 || || || || | || || || |||| | |||||||| | |||| |||| Sbjct 4989 ATGAAGTCTGGGGGGAGAAGTTCGAGGAGCTGTACACCCGTTACGAGAAGGAGGGAAAGG 4930 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | | | | || | || | ||| ||| | || | || || ||||||| Sbjct 4929 CAAACAGAACTGTGAAAGCACAAACGCTTTGGTTTGCCATTATAGAATCTCAAGTGGAGA 4870 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || || || ||||| | | ||| || || |||| ||||||||| || ||| || Sbjct 4869 CCGGAACTCCGTACATGCTCTACAAAGATGCTTGCAACCGCAAGTCCAATCAACAGAACA 4810 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 |||| |||||| || ||||| ||||| |||||||||||||| | | ||||| | Sbjct 4809 TCGGCACCATCAAGTGCAGTAATCTTTGCACTGAGATTGTCGAGTACTCCGCACCGGATG 4750 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACA 94669 |||||||||| || ||| ||| ||||| ||| || ||||| | || | | Sbjct 4749 AGATTGCTGTTTGCAACTTGGCTTCCATTGCGCTGAACATGTTCGTCAC---TCCCGATA 4693 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT---CT 94726 | || |||| | || || | | | || | || ||| || | Sbjct 4692 AGAA---------GTACGATTTCCAGAAGTTGAAGCAAGTCAC---AAAGATTGTGACCC 4645 Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786 ||| |||||| |||| ||| || |||||||| | || |||||| |||| |||| Sbjct 4644 GCAACTTGAACAAAATAATTGACGTCAATTTCTACCCAATGCCAGAGGCGAAGAAATCAA 4585 Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846 || || || || ||||| ||||| || || || ||||| ||||| || | ||| Sbjct 4584 ACACACGACACCGCCCAATCGGAATCGGTGTTCAAGGATTCGCCGACGCACTCATTCTGA 4525 Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 |||| || ||||| | | || | | || | || ||||||| || Sbjct 4524 TGCGCTATCCATACGAGAGCGAACAATCGCAACTTCTCAACCAACAAATCTTCGAAACCA 4465 Query 94907 TTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965 | || || || || | || ||| | || ||| | | ||| | || ||| || Sbjct 4464 TCTACTATGGAGCACTAGAGGCAAGCTGTGAACTGGCCGAGA----AGCTTGGACCATAC 4409 Query 94966 GAATCGTTCCGCGGATCGCCC-TTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 ||| | | || | ||| || | | |||| || |||||| |||| | ||| Sbjct 4408 GAAACCTATGAGGGTTGTCCCGTTAGTA-AGGGAATACTTCAGTACGACATGTGGAACAA 4350 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 | | || | | ||||| || |||| ||||| | | || || |||||||| Sbjct 4349 GGAACCAACTGATCTGTGGGATTGGGCTGCTCTGAAGGAGAAAATTGCTAAGCACGGTGT 4290 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 | ||| |||| || | || || ||||| || || || || ||||| ||||||||||| Sbjct 4289 TAGGAACTCGCTCCTGATTGCTCCAATGCCGACAGCTTCTACAGCGCAAATCCTTGGCAA 4230 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||| ||||| || || | ||| || ||| | ||||||||||| || || | || || Sbjct 4229 CAACGAATCGTTTGAGCCGTACACATCGAACATCTACAACAGGCGTGTCCTGTCTGGCGA 4170 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGA 95264 |||| || |||| | ||||| || ||| || || ||| |||||| || Sbjct 4169 GTTCCAAATCGTCAATCAACACCTACTTAAGGATCTCACTGAGTTGGACTTGTGGGACGA 4110 Query 95265 CAAGGTCAAGAACCAACTGCTACGCGCCAAC--GGCTCCGTCCAGAACATCCCGCAAATA 95322 | | ||||| || | | ||| |||| || || ||||| | ||| || ||| Sbjct 4109 TGACATGAAGAATGAAAT-CATCGC-ACAACGAGGATCAATCCAGCAAATCGAGCGAATT 4052 Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 || | || ||| | ||| |||||||| ||||||||||| Sbjct 4051 CCACAAGAAATCCGTGAGCTGTACAAGACTGTGTGGGAGAT 4011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493819118088160