Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq79726 268 9e-67 >seq79726 Length=8148 Score = 268 bits (296), Expect = 9e-67 Identities = 954/1469 (65%), Gaps = 48/1469 (3%) Strand=Plus/Plus Query 152706 TGCGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCA--CG 152763 || || || ||||||||||| | || |||||||| || |||||||| ||| || Sbjct 3831 TGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCCAGTCTTGAGGCCCGCCTTCCAGCCG 3890 Query 152764 AGTAATTGTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACG 152823 | || |||||||||||||| |||| |||||| ||||| | || |||| Sbjct 3891 AAGAA--GTGAATCGAAGTCAATTTTCCGTAGTTCGGTTCAGCCACATGAATGTTGAACG 3948 Query 152824 ATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGTTTTGCCT 152883 |||| || ||||| ||||| ||| | ||||| ||||| | ||| | || Sbjct 3949 ATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGCCATTTTAATGGTCGACCGCACCG 4008 Query 152884 TCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGT---ATACCTTCAATGT 152940 |||||||| | || ||||||| | | | | || || || | || || | Sbjct 4009 ATATCTCCCACACAGTCTTGTACAGCTC---ACGGATTTCTTGTGGAATTCGCTCGATTT 4065 Query 152941 TCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGT-ACACGTTC 152999 ||| || || || ||||| | || | || || || ||| ||| || | Sbjct 4066 GCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTCATGTCAT-CGTCCCACAAGTCC 4124 Query 153000 AGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACT 153059 | | | |||| || | | | || || ||||| | ||| |||||||| | || || Sbjct 4125 AACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATTTGGAACTCGCCAGACAGGACA 4184 Query 153060 CGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGA 153119 || || || | || ||| | || ||||| |||||||| ||||| || ||||| Sbjct 4185 CGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGATTCGTTGTTGCCAAGGATTTGC 4244 Query 153120 GCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGA 153179 || || | || |||||||| || | || | || |||| | |||||| | Sbjct 4245 GCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAGTTCCTAACACCGTGCTTAGCA 4304 Query 153180 ATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCG 153239 || | ||||||| || |||||||||||| | | ||| | ||||||||||||| Sbjct 4305 ATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGTTGGTTCCTTGTTCCACATGTCG 4364 Query 153240 TACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTC---G 153296 ||||| | | ||| ||| |||||| || || | || ||| || ||| | Sbjct 4365 TACTGAAGTATTCCCTTACTAACGGGACAACCCTCATAGGTTTCGTA--TG--GTCCAAG 4420 Query 153297 CGT-TGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTG 153355 | | | ||||||||| ||||| ||||| || || |||||||| ||||||||| |||||| Sbjct 4421 CTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAAGATTTG 4480 Query 153356 TTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTC 153415 || ||||||| || || |||||||||||| || ||||| ||| | | ||||| Sbjct 4481 TTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCGCATCAGAATGAGTGCGTC 4540 Query 153416 GGCCAGACCCTGGATACCGACGCCGATGGGTCGATG-CTTCTCGTTG----CTGCGCCTC 153470 ||| | || || | ||||| ||||| || || || | | | ||| || |||||| Sbjct 4541 GGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTCTTCGCCTC 4600 Query 153471 GCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACT 153530 || || || ||| |||| || || |||||||| | |||||| ||| | Sbjct 4601 TGGC-----ATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACAATC 4655 Query 153531 TTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGA 153590 || || | ||| | |||| |||||| || || | ||| | | | ||| | Sbjct 4656 TTTGTGACTTGCTTCAACTTCTGGAAATCGTACTTCTTATCG--GGAGTG-ACGAACATG 4712 Query 153591 TTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACG 153650 |||| ||||| || |||| || || || || |||| || | || ||||| || Sbjct 4713 TTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACA 4772 Query 153651 ATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGA 153710 ||||| | ||| || || ||||| || ||| ||| | || || |||||| ||||| Sbjct 4773 ATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGCGG 4832 Query 153711 TTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT- 153769 ||||| || |||||| ||||||||||||| |||||||| ||||| | ||| | || Sbjct 4833 TTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAATG 4892 Query 153770 --AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGC--GGCCCTCGCTCTCGT 153825 ||||| | || || || ||| || | | | | | || ||||| |||||| Sbjct 4893 GCAAACCAAAGC--GT-TTGTGCTTTCA--CAGTTCTGTTTGCCTTTCCCTCCTTCTCGT 4947 Query 153826 ATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGAT 153885 | || |||||| ||| |||| || || || || | ||||| |||| || Sbjct 4948 AACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACCGGGGCACTTAT 5007 Query 153886 GCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCA 153945 | || ||||||| ||||| ||||||| | || || |||||||||||| || | Sbjct 5008 GTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAACAGATCGGGAA 5067 Query 153946 CCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCA 154005 ||| || || || | | ||||| || || |||||| || |||| |||| Sbjct 5068 TCCATAGAGCATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGGTGTTCTTCTTCA 5127 Query 154006 GAT-TGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCT 154064 || || || | | ||||||| | |||||||| || | ||| | ||| | ||||||| Sbjct 5128 AATCCAAGAACTC-AAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGGCGAAGGCACCT 5186 Query 154065 TTACGCTTTCCG---CCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATG 154121 ||||| ||| || || ||||| | || | | |||||||| | | || ||| Sbjct 5187 GGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTGAACCCTCTCAGCATT 5246 Query 154122 GGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 || | |||||| ||| ||| ||||| || Sbjct 5247 GGAACAAGGCCGTTTGAGGTACCGTTTGT 5275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495355505277120