Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq145640 127 8e-25 >seq145640 Length=1325 Score = 127 bits (140), Expect = 8e-25 Identities = 191/269 (71%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 111 TTTTTACCAGTTTCGCCATCGCAATAGTGGCGTACACATCAGCCATCGCATCGTGGGCGT 170 |||| | || || ||||| ||||||| || |||||||||| ||||||||| || || | Sbjct 1057 TTTTCATCAACTTTGCCATTTCAATAGTCGCATACACATCAGACATCGCATCATGAGC-T 1115 Query 171 TGCT-ATGTTCAATACCATTCGCTTTGGTTAAATGCTCAAGGCGAAAGCTCGGTAGACCG 229 || | ||| ||| ||| ||||| || ||||| || | ||| || || ||||| Sbjct 1116 TGTTCATGACTAATCTGATTAGCTTTAGTCAAATGTTCTAATTTAAAACTTGGCAGACCA 1175 Query 230 TCATCATTTTCAGGCCAGTTTATTCCTTCCGGGCGCAGGGCATAGCAGGCACGCATAACA 289 |||||||| ||||| ||||| || || || | || || || ||||| | | ||| Sbjct 1176 TCATCATTGAGCGGCCAATTTATACCATCAGGCCTAAGCGCGTAACAGGCCCTAACGACA 1235 Query 290 TCCAGTAAATCCCAGCGCGAGTTATCATGCTGCCAGCTCCAGGCGTAAGGATCGTAGAAA 349 || ||||||||||| || || |||| | ||||| || | ||| ||||| |||||| Sbjct 1236 TCAAGTAAATCCCAACGTGAATTATTGTTTTGCCAACTATAACTGTAGGGATCATAGAAA 1295 Query 350 TTACGATAAAAAACGTTGCGTGTGACTTC 378 || ||||| | | || || || ||||| Sbjct 1296 TTGCGATACAGCAAATTACGGGTTACTTC 1324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198403756680168