Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq79726 104 2e-17 >seq79726 Length=8148 Score = 104 bits (114), Expect = 2e-17 Identities = 472/730 (65%), Gaps = 34/730 (5%) Strand=Plus/Plus Query 146062 TGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAAC 146121 || ||||| | || |||||||| | || || ||||| || | ||| ||| || Sbjct 4152 TGATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTAC 4211 Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181 ||||| ||||| |||||||| || || || ||||| || | ||| || ||||| || Sbjct 4212 GGCTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCA 4271 Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAATT 146240 | ||| | ||||| || || ||||| ||| | ||| || ||| || | ||||| Sbjct 4272 ATCAGGAGCGAGTTCCTAACACCGTG-CTTAGCAATTTTCTCCTTCAGAGCAGCCCAATC 4330 Query 146241 CCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCA-TAGTGCCGCGGAACA 146299 ||||| |||| || || | | || | ||||||| || | || | || | | Sbjct 4331 CCACA---GATCAGTTGGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTA-A 4386 Query 146300 GGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTT 146359 ||| | | ||| || | ||| || || || ||| ||||||||| ||||| || | Sbjct 4387 CGGGACAACCCTCATAGGTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCT 4446 Query 146360 CCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCCTCCTCG 146418 | || || | |||| ||||| || ||| | ||||| | || | | ||| Sbjct 4447 CTAGTGCTCCATAGTAGATGGTTTCGAAGATTTGTTGGTTGA-GAAGTTGCGATTGTTCG 4505 Query 146419 CTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACC 146477 || ||||| || ||| || | || | | |||||||||| || || | |||| || Sbjct 4506 CTCTCGTATGG-ATAGCGCATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCC 4564 Query 146478 AACGGGGCGGTGTTTCTTGTTAC---TGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCT 146534 | ||||||||| |||| | ||||| | | ||| |||| ||| ||| Sbjct 4565 GATTGGGCGGTGTCGTGTGTTTGATTTCTTCGC--CTCTGGCATTGGG-TAGAAATTGAC 4621 Query 146535 GTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACATA 146594 ||| || || ||||| | || || ||||| || || | | |||| || | Sbjct 4622 GTCAATTATTTTGTTCAAGTTGCGGGTCACAATCTTTGTGACTTGCTTCA-----ACTTC 4676 Query 146595 GTCAAATGTTTTAGTT-TTAACGT---TGACGCACTTGTTGACGGCGATAGAGGCCAAGT 146650 |||| | | || ||| || ||||| || |||| | || || || ||||||| Sbjct 4677 TGGAAATCGT--ACTTCTTATCGGGAGTGACGAACATGTTCAGCGCAATGGAAGCCAAGT 4734 Query 146651 TACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGC 146710 | || || ||| |||| ||| || | |||| |||||||| | ||| || || |||| Sbjct 4735 TGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTGC 4794 Query 146711 ACTTGATGATGCCCAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTTGTAGA 146767 |||||||| |||| | | || || | | | |||| |||||| | || ||||||| Sbjct 4795 ACTTGATGGTGCCGA---TGTTCTGTTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGA 4851 Query 146768 GCATGTACGG 146777 |||||||||| Sbjct 4852 GCATGTACGG 4861 Score = 95.1 bits (104), Expect = 1e-14 Identities = 181/257 (70%), Gaps = 10/257 (4%) Strand=Plus/Plus Query 147308 GCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGG 147367 |||||||||||||| |||| || || || | || |||| ||||||| || || | Sbjct 5636 GCAGGAAACACGAAGACATCTGCGGCCGTCTTGTAGCCGCGGCAAACATTGTCGGAGACG 5695 Query 147368 CGTGCGTGAACGTGCC---CAGACTCATCAATTGATACGTTTCAATGGCGCTCAT-AACG 147423 | || ||||| || || ||||| | | ||| |||||||||||||||| ||| || | Sbjct 5696 CATGGGTGAA-GTACCTCTCAGACA-AGAAGTTG-TACGTTTCAATGGCGC-CATCAATG 5751 Query 147424 TCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATC 147483 || || ||||| || | | | || | ||| ||||| ||||| || || ||||||||| Sbjct 5752 TCCTCACCGTGTATTCCAACAGACACTCTCATTAGCATATGCTGTGGACGCTCCGCAATC 5811 Query 147484 ACGTCATTGACTTTTAATAGATATCCATTGGTC-AGAGTTTTGAAACCAAAGTACTTGTA 147542 | || | || | ||||| | | | || || || |||||||||||||| ||||| Sbjct 5812 TTCCCGTTAATCTTCAGCAGATA-CGAACGCTCTAGCGTCTTGAAACCAAAGTAATTGTA 5870 Query 147543 GTCGTAGTCCCTGTTGT 147559 | |||| |||| || Sbjct 5871 ACCAAAGTCTCTGTCGT 5887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474631846063040