Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_012638.1 Length=165429 Score E Sequences producing significant alignments: (Bits) Value seq145875 102 9e-17 >seq145875 Length=1531 Score = 102 bits (112), Expect = 9e-17 Identities = 294/444 (66%), Gaps = 14/444 (3%) Strand=Plus/Minus Query 136605 TCATCATAATAACGTCCAATGGATTCAGCACGTTTCATAATAGCTTCATCTAATACAATC 136664 ||||||||||| | | ||| | | |||||||| ||| | || | ||||| Sbjct 1451 TCATCATAATAGCCAGCGATGTCTCCTGCACGTTTTTGAATTTCGGTATTTGTCACAATA 1392 Query 136665 TCATCAAATACCTTCGATGGATCAGTATAAAGATTTCGCATGATATGAGTATATGAACGG 136724 |||||||| || ||||||||||| | | || || || ||||| ||||| || || Sbjct 1391 TCATCAAAGACAATCGATGGATCATTGACGATGTTACGAATAATATGGGTATAAGATCGC 1332 Query 136725 CTGTGAATAGTTTCACTAAAAGTCCACGTAGCAACCCATGTATCAAGGCTTGGGT-CTGA 136783 ||| |||||||| ||| | |||||| ||||||| || |||| ||| ||| ||| Sbjct 1331 GAGTGGATAGTTTCTGAAAATGACCACGTTTCAACCCAAGTTTCAA-GCTCAGGTATTGA 1273 Query 136784 AATTAATGACATAAGTACAGCAGACGGCGCACGACCCTGAATGCTATCCA--AAAGTGAT 136841 |||||| | | | | | || ||| || || ||||| ||||| ||||| | Sbjct 1272 AATTAAAGGGAGCAATGCGACATTCGGACTGCGTCCTTGAATCGAATCCAGTAAAGT--T 1215 Query 136842 TGATACTTCAGATTATTAGTAAAAATATTTTGCTGATACTGAGGAAG--CTTATTAAACT 136899 ||||| || | ||| | ||||||||| || | || | |||||| | ||| | Sbjct 1214 TGATATTTTAAGTTACTGATAAAAATATGTTTTTCATGTTCAGGAAGTCCAGCATAATCG 1155 Query 136900 GTGCAGCATCCATCATCAAGTTT--ACTTCTTCAGGACGCCAGAAAAATGATAAAGACTT 136957 | | ||| | | || | | |||||||| || ||||| ||||| ||||| ||| Sbjct 1154 ATTC--GATC--TTGTGAAATATCCACTTCTTCTGGCCGCCAAAAAAAAGATAACTGCTT 1099 Query 136958 CTCAGTAAGTTCTTCAAATACTCGATGCCGTTGAATATCATAACGCGCAATACCAAGACC 137017 ||| | |||| |||||| | | || ||| |||||||||||||| | || Sbjct 1098 TTCAATTAGTTTTTCAAAAATTTCATATTTTTGTTGATCATAACGCGCAACATTAACCGA 1039 Query 137018 TGAACCAAAAAACATAGGTTCTTT 137041 | |||| |||||| |||||||| Sbjct 1038 TTGTCCAAGAAACATCGGTTCTTT 1015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 528277631590240