Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq79726 212 6e-50 >seq79726 Length=8148 Score = 212 bits (234), Expect = 6e-50 Identities = 992/1568 (63%), Gaps = 38/1568 (2%) Strand=Plus/Minus Query 123124 ATTGCGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAG 123183 ||||||| |||| || || | || || ||||| ||| | || |||||| | | || | Sbjct 5358 ATTGCGCCATGATATCAAAGTCTGCGGGAGGCATTGGCATCAATGTGCACTGCATTAGGG 5299 Query 123184 GCCGCGGAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGC 123243 | |||| | | || | || |||| | | | ||| || | | |||||| Sbjct 5298 CCAAGGGAACCGGTATTGCTGGAACAAACGGTACCTCAAACGGCCTTGTTCCAATGCTGA 5239 Query 123244 GAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCAAAGGCGCGA 123300 ||| | ||| |||| || ||| | |||||||| || |||||| || ||| || Sbjct 5238 GAGGGTTCAACAACGTCGCTCGGTATGTCGACCAAGGAGGCGGCAAGCGACCAGGTGCCT 5179 Query 123301 TGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCA 123360 | || || || | || || ||||| || | | || || || |||| || | Sbjct 5178 TCGCCATTTACTTGGAGCCCTGGCATTCGGACATCTTTGAGTTCTTGGATTTGAAGAAGA 5119 Query 123361 ACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATT 123420 ||| || ||| || || | ||| ||||||||||| || ||| ||||| | |||||| Sbjct 5118 ACACCGGAAAGGAGGAGAACAGAGCTCGCGATTTGTTCTATGCTCTATGGATTCCCGATC 5059 Query 123421 TGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTC 123480 |||| ||| || || ||| |||||||| ||||| | ||||| || || ||| | Sbjct 5058 TGTTCATGAAGCGAGTGGAAGCCGACGGCGACTGGTCTTTGATGTGCCCACATAAGTGCC 4999 Query 123481 CCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCG 123540 |||| ||| || || | || | |||| || ||| ||||| | | |||||| | Sbjct 4998 CCGGTTTGCATGAAGTCTGGGGGGAGAAGTTCGAGGAGCTGTACACCCGTTACGAGAAGG 4939 Query 123541 A-----AGGCAAACAGGTTAGTCAGGTTCCGGCACGT--GATTTGTTCAAATTT--ATTA 123591 | |||||||||| || | |||| | |||| | || |||| Sbjct 4938 AGGGAAAGGCAAACAGAACTGTGAAA-----GCACAAACGCTTTGGT----TTGCCATTA 4888 Query 123592 TCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGA 123651 | ||| | ||||| || |||||||| |||||||||||||||||||| || |||||| | | Sbjct 4887 TAGAATCTCAAGTGGAGACCGGAACTCCGTACATGCTCTACAAAGATGCTTGCAACCGCA 4828 Query 123652 AAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCG 123711 | ||||||| ||| | || || || || || |||||||||||| | || ||| ||| Sbjct 4827 AGTCCAATCAACAGAACATCGGCACCATCAAGTGCAGTAATCTTTGCACTGAGATTGTCG 4768 Query 123712 AATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG-TGAA---- 123766 | ||| || | ||| | | || || || || |||||||| | ||||| |||| Sbjct 4767 AGTACTCCGCACCGGATGAGATTGCTGTTTGCAACTTGGCTTCCA-TTGCGCTGAACATG 4709 Query 123767 -TCGTTGCGTCGAAAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTG 123825 |||| | | | | | | | ||||||| | | | || | | ||||| | || Sbjct 4708 TTCGTCACTCCCGATAAGAAG--TACGATTTCCAGAAGTTGAAGCAAGTCACAAAGATTG 4651 Query 123826 TAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTT 123885 | || ||||||||||| || || || ||||| || || || || ||| Sbjct 4650 TGACCCGCAACTTGAACAAAATAATTGACGTCAATTTCTACCCAATGCCAGAGGCGAAGA 4591 Query 123886 TGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTG 123945 || || |||| | || ||||| | || ||||||| || |||||||| | Sbjct 4590 AATCAAACACACGACACCGCCCAATCGGAATCGGTGTTCAAGGATTCGCCGACGCACTCA 4531 Query 123946 TAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCG 124005 | || ||||| || ||||| ||||| || | | | || || ||||| || Sbjct 4530 TTCTGATGCGCTATCCATACGAGAGCGAACAATCGCAACTTCTCAACCAACAAATCTTCG 4471 Query 124006 AAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGT 124065 |||| || || || || || | ||||| ||||| ||||| || | | | || | | Sbjct 4470 AAACCATCTACTATGGAGCACTAGAGGCAAGCTGTGAACTGGCCGAGAAGCTTGGACCAT 4411 Query 124066 ACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATG 124125 |||||| || | ||| | || | || || || | ||||||||||||||||| Sbjct 4410 ACGAAACCTATGAGGGTTGTCCCGTTAGTAAGGGAATACTTCAGTACGACATGTGGAACA 4351 Query 124126 CTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTT 124185 ||| || || ||||||| ||| | | | || | || | | ||||||| Sbjct 4350 AGGAACCAACTGATCTGTGGGATTGGGCTGCTCTGAAGGAGAAAATTGCTAAGCACGGTG 4291 Query 124186 TGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAA 124245 | | |||||||| || | || |||||||| || | || || ||||| | || | Sbjct 4290 TTAGGAACTCGCTCCTGATTGCTCCAATGCCGACAGCTTCTACAGCGCAAATCCTTGGCA 4231 Query 124246 ACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCG 124305 |||||||||| || ||||||| ||| || | ||| | || || | | |||| Sbjct 4230 ACAACGAATCGTTTGAGCCGTACACATCGAACATCTACAACAGGCGTGTCCTGTCTGGCG 4171 Query 124306 ATTTTCAAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATG 124365 | || ||| | | ||||| || | | | || | | ||| | |||| || | Sbjct 4170 AGTTCCAAATCGTCAATCAACACCTACTTAAGGATCTCACTGAGTTGGACTTGTGGGACG 4111 Query 124366 AAAACATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTC 124425 | ||||| || ||||| || || | || | |||| |||| |||| Sbjct 4110 ATGACATGAAGAATGAAATCATCGCACAACGAGGATCAATCCAGCAAATCGAGCGAATTC 4051 Query 124426 CGGAACACGTCAAGCAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTA 124481 | || | || | |||||||| || |||||||| || | | || |||| Sbjct 4050 CACAAGAAATCCGTGAGCTGTACAAGACTGTGTGGGAGATATCGGTGCGGTCGACCATTA 3991 Query 124482 ATTGAAATGGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTT 124541 ||||||| | ||| | ||||||| || |||||||||||||| || ||| | | Sbjct 3990 ----AAATGGCTGCCGATAGGGGCGCGTTCATCGATCAAAGTCAATCGTTCAACATTCAT 3935 Query 124542 GTAGCGGAACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGCGGA 124601 || || ||||| | ||||| |||| || ||| | || |||| || Sbjct 3934 GTGGCTGAACCGAACTACGGAAAATTGACTTCGATTCACTTCTTCGGCTGGAAGGCGGGC 3875 Query 124602 CTCAAAACGGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACC 124661 ||||| || |||||||| ||| || | || || ||||| || |||| || || || || Sbjct 3874 CTCAAGACTGGCATGTACTACCTACGCACAAAGCCGGCAGCACATGCGATCCAGTTCACT 3815 Query 124662 GTCGACAA 124669 || ||||| Sbjct 3814 GTGGACAA 3807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451177186752160