Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq146010 96.9 4e-15 >seq146010 Length=1781 Score = 96.9 bits (106), Expect = 4e-15 Identities = 405/631 (64%), Gaps = 14/631 (2%) Strand=Plus/Plus Query 37531 ATCAGGGTAAAGACGCTTACTAGAACATTCCAATGCAAGTTGCTTAATGTCGTAGTTCGG 37590 ||| ||||| | ||||||||| | |||||| ||||| |||| || || || || || Sbjct 579 ATCGGGGTACATACGCTTACTTGCACATTCTAATGCGAGTTTTTTGATATCATAATTGAT 638 Query 37591 ATCTTCCGGTTTAAGGTTTAATCCTTCTTCTAAGAACATCACCAGCTTAGGAAACACCGG 37650 ||| | ||| | || | || |||| || | ||||| || ||||| || | Sbjct 639 ATCACCAACCTTATGATTAACGCCATCTTTTATTGCAAACACCAATTTTGGAAAAACTGC 698 Query 37651 AGTTATACCGTCTTTACCTAAACCTTTAGTTCGAACTTTCAGGATCGCTTTCTGAATCAG 37710 ||| | || || ||||| ||||| || | ||| | || | || || || || Sbjct 699 TGTTTTGTGGTTCTTTCCTAATCCTTTTAAACGTATTTTTAAAATAGATTCTTGGATGAG 758 Query 37711 TTTTTCTTCCCAGCTAGTACCCATACCAAAGGTTAAAGTCACAAAAGGTGTTTGACCGTT 37770 | | |||||| || |||| | |||||| || || ||||| || |||||||| || Sbjct 759 TCGTGATTCCCAACTTTTACCTAATCCAAAGCCAAATGTAACAAATGGCGTTTGACCATT 818 Query 37771 GGTAGAGAACAAAGTGTTGATCTCATATTCCAACGCCTGATATCCGTC-TAACGTTTCTT 37829 | | | | ||||| | || || || | | || || | || |||| | ||| Sbjct 819 AGCGGTGTGGAGTGTGTTCACTTCGTACTCAAGAGATTGGAATGCATCATAACACT-CTT 877 Query 37830 TTTCTGTTTTCTCTTGTGCATAGAGAGTATCAGCTTTGATT---CCGTAGGTTTCGGCAT 37886 |||| || | || ||||||| | | | ||| ||| | | || || | | Sbjct 878 TTTCAGTGCGATTTTTTGCATAGTGGTCAGGATTTTTTATTTGCCACTCTGTCGCGACTT 937 Query 37887 CAGCAAGGTGTTTATGATATGTTTTCTTAACATACGGCGCTAACACCTGGTCGAT--GTT 37944 | ||||| ||||| | | ||||| | ||||| | || ||||| | | Sbjct 938 GCTTA---TGTTTTTGATAACTGATACTAACAAATTTTGCTAATATCTCATCGATACGAT 994 Query 37945 TGCAATTGTGGTCCCGCCATATTGATGACTTGCCACCTGTGCGATAATTTGAGCGGTTAC 38004 | |||||| || || || || ||| ||||||||||| || ||||||||||| || || Sbjct 995 T--AATTGTCGTTCCACCGTAAATATGGCTTGCCACCTGAGCAATAATTTGAGCCGTGAC 1052 Query 38005 AGCACATGCAACACCGATCGATTTAGGACTTTCGATTTGTGCGCTACCCAATTTAAAACC 38064 || ||| | || |||||||| ||| |||| ||| | |||| ||||||||| Sbjct 1053 CGCGGTTGCCGTTGCAATAGATTTAGGCGGTTCAATTTCGGCGTTGCCCATTTTAAAACC 1112 Query 38065 ATTCTCTAACATGTCTTTGAGATTAACAAGACA-GCAGTTAGTAAACGGCATAGCTGGTG 38123 || | |||| | | |||| | | ||| ||| ||| | || | | ||||| Sbjct 1113 GTTGGTAAGCATGCCATCTAGATCGATTA-ACATGCAATTAAACATTGGAAAAAATGGTG 1171 Query 38124 CATAATCCATATCATGATAATGAATATCACC 38154 ||||||||| ||||||||||||||| || || Sbjct 1172 CATAATCCAAATCATGATAATGAATTTCTCC 1202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531436648076480