Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq79726 111 2e-19 >seq79726 Length=8148 Score = 111 bits (122), Expect = 2e-19 Identities = 806/1275 (63%), Gaps = 43/1275 (3%) Strand=Plus/Plus Query 115551 CTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCAT 115610 ||||| || ||||||||||| || |||||||| ||| ||||||| | | | || || Sbjct 3842 CTTTGTGCGTAGGTAGTACATGCCAGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAAT 3901 Query 115611 TGAGGACAACTTGGAG-AGTGTTGGACTTTC-----CATGAAGAGGTTCATACTTTGGGA 115664 || | ||| || | ||| | || ||| |||||| ||| | ||| Sbjct 3902 CGAAGTCAATTTTCCGTAGT-TCGG---TTCAGCCACATGAAT--GTTGAACGATTGACT 3955 Query 115665 TTGATCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTT 115723 |||||||||||| ||| |||| ||| || ||||| | ||| | || | || | Sbjct 3956 TTGATCGATGAACGCG-CCCCTATCGGCAGCCATTTTAATGGTCGACCGCACCGATATCT 4014 Query 115724 CCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAG 115783 |||||||||| |||| || | || || | ||| || | |||| | ||||| | Sbjct 4015 CCCACACAGTCTTGTACAGCTCACGGATTTCTTGTGGAATTCGCTCGATTTGCTGGATTG 4074 Query 115784 AGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGA-GACCAATCTTCTTG 115842 | || | | || || || |||||| || | ||| | | |||| || || Sbjct 4075 ATCCTCGTTGTGCGATGATTTCATTCTTCATGTCATCGTCCCACAAGTCCAA-CTCAGTG 4133 Query 115843 AGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 115902 ||||||| | ||||| | |||||| | ||||| || | ||| || || Sbjct 4134 AGATCCTTAAGTAGGTGTTGATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGTTG 4193 Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | ||||| |||||||| | || ||||| || | |||||| ||||| || Sbjct 4194 TAGATGTTCGATGTGTACGGCTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAA 4253 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 ||||| ||||| || || || || || ||| | | ||| | ||| ||| Sbjct 4254 GCTGTCGGCATTGGAGCAATCAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCTCC 4313 Query 116023 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080 || || || |||| || | | | || ||| ||| | |||||| || |||| | Sbjct 4314 TTCAGAGCAGCCCAATCCCACAGATCAG--TTGGTTCCTTGTTCCACATGTCGTACTGAA 4371 Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140 | || || | | || | |||||| | || || ||||| || ||| |||| Sbjct 4372 GTATTCCCTTACTAACGGGACAACCCTCATAGGTTTCGTATGGTCCAAGCTTCTCGGCCA 4431 Query 116141 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA--- 116197 ||| |||| ||||| || ||| | | || || || || || || | || | Sbjct 4432 GTTCACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAAGATTTGTTGGTTGAGAA 4491 Query 116198 -TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA-CAAAATAAATACATCCGCGAG 116255 |||| | | ||| || | | || | ||| || ||| | | | || |||| Sbjct 4492 GTTGCGATTGT----TCGCTCTCGTATG-GATAGCGCATCAGAATGAGTGCGTCGGCGAA 4546 Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC-CA 116314 ||||| ||||||| || |||||||| |||| | || || || || ||| || Sbjct 4547 TCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTCTTCGCC-TCTGGCA 4605 Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 || || ||||| || || | | || | || ||| |||| |||||||| || Sbjct 4606 TTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACAATCTTTGTGACTT 4665 Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 116434 | | ||| | | |||| | || | | || | |||| || | || || | Sbjct 4666 GCTTCAACTTCTGGAAATCGTA-CTTCT--TATCGGGAGTGACGAACATGTTCAGCGCAA 4722 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 | || |||| || || |||| |||||||| | | |||||| | ||| || || | Sbjct 4723 TGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCTCAGTGC 4782 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 | | ||| | ||| |||||||| | ||||| |||||| ||||| ||| || |||| Sbjct 4783 AAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGCGGTTGCAAGCAT 4842 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA 116614 | ||||||||||| || || || || |||||| ||| || | | ||| || ||| | Sbjct 4843 CTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAATGGCAAACCAAA 4902 Query 116615 -CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGG 116673 | | | ||| |||||| ||| || ||||||| |||||| ||||| || Sbjct 4903 GCGTTTG-TGCTTTCACAGTTCTGTTTGCCTTTCCCTCCTTCTCGTAACGGGTGTACAGC 4961 Query 116674 GCCTCAAACTCTTCACCCACAGCCT--CTGAGAGCCCTGGTGC-CTTATCTGGACAGAAG 116730 |||| |||| || ||| ||| || || | || || || ||||| ||| || | Sbjct 4962 TCCTCGAACTTCTC-CCCCCAGACTTCATGCAAACC--GGGGCACTTATGTGGGCACATC 5018 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 | |||||| | || | | || || ||||||||||| || || || ||||| || || Sbjct 5019 AAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAACAGATCGGGAATCCATAGAGCA 5078 Query 116791 GAGAAGAGATCCCGA 116805 |||| | ||| ||| Sbjct 5079 TAGAACAAATCGCGA 5093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612386046267360