Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq79726 149 1e-30 seq25219 93.3 7e-14 >seq79726 Length=8148 Score = 149 bits (164), Expect = 1e-30 Identities = 401/605 (66%), Gaps = 20/605 (3%) Strand=Plus/Plus Query 203837 GTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896 ||||||||||| |||||||| || || | | || ||| | | | || ||||||||| Sbjct 3804 GTCTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATG 3863 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 || ||||| |||||| || ||| ||| | | ||| || |||| || ||| | ||| Sbjct 3864 CCAGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTC 3923 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 || || |||| |||||||| | || || ||||| |||||||| | ||| ||| || Sbjct 3924 GGTTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCA 3983 Query 204017 GCCATATTGATAATGGTCTTCTG---CGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073 ||||| | |||||||| | | ||| ||||||||||| |||||| ||| || | | Sbjct 3984 GCCATTT---TAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCACGG 4040 Query 204074 GTGTGTTGAGGCACATCTTCCCACG---TCCT-GATCGAGC--CGTTGTCGGCCATCAGT 204127 | | ||| || | ||| | || | || ||| || | |||||| || || | | Sbjct 4041 ATTTCTTGTGGAA----TTCGCTCGATTTGCTGGATTGATCCTCGTTGT--GCGATGA-T 4093 Query 204128 CTCA-TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGG 204186 ||| || || | || || |||||| | ||||| | || ||| | ||||| | Sbjct 4094 TTCATTCTTCATGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTG 4153 Query 204187 GTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGG 204246 |||| ||| || || || || ||||| || | | | || | | ||| ||| | || Sbjct 4154 ATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGG 4213 Query 204247 TTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAG 204306 || |||| ||||||||||| | || || || || || || ||||| ||||| | Sbjct 4214 CTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAAT 4273 Query 204307 GAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTG 204366 || || ||||| | ||||||| || | | |||||||| | ||| || Sbjct 4274 CAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCA 4333 Query 204367 CATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCT 204426 || || | |||| | | |||||||||| |||||| || || | ||| || || | Sbjct 4334 CAGATCAGTTGGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACA 4393 Query 204427 GCCCT 204431 |||| Sbjct 4394 ACCCT 4398 >seq25219 Length=1370 Score = 93.3 bits (102), Expect = 7e-14 Identities = 225/340 (66%), Gaps = 7/340 (2%) Strand=Plus/Minus Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805 |||| | ||| || |||||||| || || | |||| | || ||||| || || | Sbjct 567 AGCAGACGGTCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAGTTCATTCCGATA 508 Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 || | ||||| || || || | | || || | |||||||| ||| ||||| | | Sbjct 507 AGATTGACGGGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACTGCTTCAGCGATG 448 Query 159866 ATCTGCGAGACACGTTCGTACCCCGGCTT--GCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 || | || ||||| | | || || || | ||||| ||| |||| || | Sbjct 447 ATGTCTATGATGCGTTCCTTGCTTGGTTTCTGCACCAAATG-----CTTGAACATCAGAC 393 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | || |||||||| || ||||||||||| || || || | ||||||||| | | || | Sbjct 392 AAGCGAAGTCGCAATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGAC 333 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | ||||||| || ||| || ||||| || || | || || ||||| || || | Sbjct 332 CGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTGAAGAAAA 273 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 |||| || || || ||||| || | || | ||||| || Sbjct 272 TCCCTTCAACTGCAGCAAATGCAATGATACGTTCACCGAA 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793702093629760