Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq79726 149 1e-30
seq25219 93.3 7e-14
>seq79726
Length=8148
Score = 149 bits (164), Expect = 1e-30
Identities = 401/605 (66%), Gaps = 20/605 (3%)
Strand=Plus/Plus
Query 203837 GTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896
||||||||||| |||||||| || || | | || ||| | | | || |||||||||
Sbjct 3804 GTCTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATG 3863
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| |||||| || ||| ||| | | ||| || |||| || ||| | |||
Sbjct 3864 CCAGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTC 3923
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
|| || |||| |||||||| | || || ||||| |||||||| | ||| ||| ||
Sbjct 3924 GGTTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCA 3983
Query 204017 GCCATATTGATAATGGTCTTCTG---CGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073
||||| | |||||||| | | ||| ||||||||||| |||||| ||| || | |
Sbjct 3984 GCCATTT---TAATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCACGG 4040
Query 204074 GTGTGTTGAGGCACATCTTCCCACG---TCCT-GATCGAGC--CGTTGTCGGCCATCAGT 204127
| | ||| || | ||| | || | || ||| || | |||||| || || | |
Sbjct 4041 ATTTCTTGTGGAA----TTCGCTCGATTTGCTGGATTGATCCTCGTTGT--GCGATGA-T 4093
Query 204128 CTCA-TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGG 204186
||| || || | || || |||||| | ||||| | || ||| | ||||| |
Sbjct 4094 TTCATTCTTCATGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTG 4153
Query 204187 GTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGG 204246
|||| ||| || || || || ||||| || | | | || | | ||| ||| | ||
Sbjct 4154 ATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGG 4213
Query 204247 TTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAG 204306
|| |||| ||||||||||| | || || || || || || ||||| ||||| |
Sbjct 4214 CTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAAT 4273
Query 204307 GAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTG 204366
|| || ||||| | ||||||| || | | |||||||| | ||| ||
Sbjct 4274 CAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCA 4333
Query 204367 CATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCT 204426
|| || | |||| | | |||||||||| |||||| || || | ||| || || |
Sbjct 4334 CAGATCAGTTGGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACA 4393
Query 204427 GCCCT 204431
||||
Sbjct 4394 ACCCT 4398
>seq25219
Length=1370
Score = 93.3 bits (102), Expect = 7e-14
Identities = 225/340 (66%), Gaps = 7/340 (2%)
Strand=Plus/Minus
Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805
|||| | ||| || |||||||| || || | |||| | || ||||| || || |
Sbjct 567 AGCAGACGGTCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAGTTCATTCCGATA 508
Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865
|| | ||||| || || || | | || || | |||||||| ||| ||||| | |
Sbjct 507 AGATTGACGGGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACTGCTTCAGCGATG 448
Query 159866 ATCTGCGAGACACGTTCGTACCCCGGCTT--GCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
|| | || ||||| | | || || || | ||||| ||| |||| || |
Sbjct 447 ATGTCTATGATGCGTTCCTTGCTTGGTTTCTGCACCAAATG-----CTTGAACATCAGAC 393
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| || |||||||| || ||||||||||| || || || | ||||||||| | | || |
Sbjct 392 AAGCGAAGTCGCAATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGAC 333
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| ||||||| || ||| || ||||| || || | || || ||||| || || |
Sbjct 332 CGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTGAAGAAAA 273
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083
|||| || || || ||||| || | || | ||||| ||
Sbjct 272 TCCCTTCAACTGCAGCAAATGCAATGATACGTTCACCGAA 233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793702093629760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |