Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq336 352 2e-91 seq119161 131 1e-24 seq52615 122 7e-22 seq46338 113 3e-19 seq2084 95.1 9e-14 >seq336 Length=4635 Score = 352 bits (390), Expect = 2e-91 Identities = 600/866 (69%), Gaps = 8/866 (1%) Strand=Plus/Plus Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 |||| |||||||||| | ||||||| ||| || | | ||| || || || ||||| | Sbjct 496 AATCGGTTCCTTCGAAAAGTGAATCAATTTCTATGCTGGCTTGCGTAGATGATGATAGCG 555 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--T 517968 ||| || || | |||||| || || | | | || | || ||| ||| | | Sbjct 556 TACGCTTTGCTCTTTCACAGGCAGTACGCAAACGACGCAGAGCAC--GCTTGTTGGTGGT 613 Query 517969 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028 || ||| |||| | ||| | |||||| || | || | || || ||||| ||||| Sbjct 614 CAGATCCTTTTTGTGTTTGCGCTTGAACTCCTGCACGAAGTGGGTAACTAGACGGTTATC 673 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 ||||||||||| ||||| | ||||| || | |||| | |||| ||||| |||||| Sbjct 674 GAAATCTTCACCGCCCAAGTGAGTATCACCAGCAGTAGACTTGACTTCGAAAATTCCATC 733 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 |||| |||| || || |||||| ||| || || |||| ||| ||||| || || || Sbjct 734 ATCAATTGACAGAATAGACACATCAAAGGTACCGCCGCCCAAATCGAAAATGAGAACGTT 793 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 ||| | || || || | ||| || |||| ||| || || || || || || Sbjct 794 GCGTTCACCCACAGCCTTCTTGTCCAAACCGTAAGCAATAGCGGCTGCTGTGGGCTCGTT 853 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 |||||| | ||| ||||| | |||||||| | || ||||| || || ||||| | || Sbjct 854 AATAATACGCAATACATTCAATCCAGCAATAGTACCGGCATCCTTGGTAGCTTGACGCTG 913 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATA 518328 ||||| || ||||| || |||||||| || || |||| | || || || | || Sbjct 914 AGAATCATTGAAATAAGCTGGAACAGTGATGACAGCATTCGAAACAGTCTTGCCGAGGTA 973 Query 518329 AGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATA 518388 ||| ||| || | ||||||||| | | | ||| || || || | || ||| | | Sbjct 974 AGCTTCTGCGGTCTCCTTCATTTTAGTGAGGACCATGGAAGAGATCTCCTCCGGGAAGAA 1033 Query 518389 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448 ||| |||| | ||| ||||| || | |||||| ||||| ||| || Sbjct 1034 AGTCTTTTTCTCATCCTTATAGATTACTTGAATTTTTGGTTTTCCTTCAACACTAACTAC 1093 Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCA 518506 || ||| ||||||| ||||| ||||| || |||| || || | || | | |||| Sbjct 1094 TTCAAAGGGCCAGTGCTTCATGTCTGACTG--CACTGGGGCATCCTCGAATTTGCGACCA 1151 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 || || ||||| |||||||| ||||| ||||||||||| || ||| | |||| || || Sbjct 1152 ATCAAACGTTTGGCATCAAAGATAGTGTTGGTTGGATTCATAGCAACCTGATTCTTAGCG 1211 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 ||||| ||||| ||| | || || ||||| || | ||||| ||||| || || ||||| Sbjct 1212 GCATCACCAATAAGACGCTCGGTATCTGTGAAGGCGACATAAGATGGTGTGGTACGATTT 1271 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686 |||||||| || ||||| ||||||||||| |||| ||| |||| |||||||| || Sbjct 1272 CCTTGATCGTTGGCAATGATTTCAACTTTGCCATGTTGGAATACTCCTACACACGAGTAA 1331 Query 518687 GTTGTTCCTAAATCAATACCAATAGC 518712 || || || ||||||||||||| ||| Sbjct 1332 GTAGTACCCAAATCAATACCAACAGC 1357 >seq119161 Length=1594 Score = 131 bits (144), Expect = 1e-24 Identities = 281/420 (67%), Gaps = 0/420 (0%) Strand=Plus/Plus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || || || ||||| || || ||||| ||||| | || ||||| ||||| | | Sbjct 965 TTTGTGATGGTAATCTTATTTTCCTTGTTGGTTGACCTTTCTAGAGCAGTTACATTCAAA 1024 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | |||||| || || |||||||||||||| || | |||| || Sbjct 1025 ATACCGTTGGCATCAATATCAAAAGTAACCTCAATTTGAGGGACACCGCGAGGAGCTGGA 1084 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | ||| | |||| || || || ||||| | |||||| Sbjct 1085 GGAATTCCAGAGAGTTCGAATTTGCCCAACAAGTTGTTGTCCTTAGTCATCGCACGTTCA 1144 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||| | | |||||| || ||| ||| || |||||||| || || ||| | | Sbjct 1145 CCCTCGTAGACTTGGATCAACACACCAGGTTGGTTGTCTGAATAGGTGGTGAATGTTTGG 1204 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 | || || ||||| || || || | | || | | | |||| | ||| || || Sbjct 1205 GTTTGCTTTGTTGGAATGGTGGTATTACGTTTGATCAAAACGCTCATCACACCGCCGGCA 1264 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 ||||| | ||| | ||| | ||||||||||||| || | || || || | || | Sbjct 1265 GTTTCAATACCCAAAGACAATGGAGTGACATCAAGAAGCAAAAGATCCTGGACTTCCTGG 1324 Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633 | | ||| | ||| || ||||| | |||||||||||| ||||||||||||||| Sbjct 1325 GACTTGTCACCGTGCAAAATGGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCATCA 1384 >seq52615 Length=2943 Score = 122 bits (134), Expect = 7e-22 Identities = 208/300 (69%), Gaps = 4/300 (1%) Strand=Plus/Plus Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||| | ||| ||||||||||| ||||| | |||| || || || |||| || Sbjct 2644 ACGTTGATCGAAATCTTCACCGCCCAAATGTGTATCGCCATTGGTTGCAACGACTTCAAA 2703 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | ||| | |||| | |||||| | || || ||| ||||| |||| ||| || | Sbjct 2704 CACTCCGTTATCAATTGTCAAAAGTGACACGTCGAAGGTGCCACCGCCCAAATCGAAGAC 2763 Query 518140 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199 | || ||| |||| || | | || || | ||| || |||| || || ||||| Sbjct 2764 CAACACGTTCTTTTCACCCTCCT---TCTTGTCCAAACCGTATGCAATGGCGGCTGCAGT 2820 Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 || |||||||||||||||| || || | ||||||||| ||||||||||| || || Sbjct 2821 GGGCTCATTAATAATTCTCATCACGTTCAAACCAGCAATAACGCCTGCATCTTTGGTAGC 2880 Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTT 518318 ||| | || | |||||| ||||| || || ||||||| ||||||| || | |||||| Sbjct 2881 TTGACGCTGAGCATCGTTGAAATAGGCCGGTACAGTAACGACGGCATGTGTAACCTTCTT 2940 >seq46338 Length=2048 Score = 113 bits (124), Expect = 3e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| |||||||||||| | || |||||||||||||||||||||||| | || || ||| Sbjct 754 GGTAAGGAAGGTCGTATTCGTGGTAATTTGATGGGAAAACGTGTCGATTTCTCGGCTCGT 813 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || || ||| | ||||||||| | | | || ||||||| ||||| | | ||| Sbjct 814 ACTGTCATCACTCCAGATCCCAATCTACGTATTGATCAAGTTGGCGTTCCACGTTCGATT 873 Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 || | |||||||| ||| ||| | ||||| Sbjct 874 GCACAGAATCTTACCTTTCCCGAGCTGGTAAC 905 >seq2084 Length=1588 Score = 95.1 bits (104), Expect = 9e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059 || |||||||| ||||||||||||||| ||||||| ||||| || | ||| | ||||| Sbjct 1538 GCTACAATAGCCTTTGGTATGGGTATTGATAAACCCGATGTAAGGTTCGTTTTGCATTAC 1479 Query 367060 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 367119 | ||||||| ||| || || |||||||||||| ||| | || ||||| ||||| Sbjct 1478 TCATTACCCAAGAGTATCGAGGGCTATTATCAAGAAGCCGGTCGTGCTGGTCGCGATGGT 1419 Query 367120 GA 367121 || Sbjct 1418 GA 1417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3773567672910376