Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq336 352 2e-91
seq119161 131 1e-24
seq52615 122 7e-22
seq46338 113 3e-19
seq2084 95.1 9e-14
>seq336
Length=4635
Score = 352 bits (390), Expect = 2e-91
Identities = 600/866 (69%), Gaps = 8/866 (1%)
Strand=Plus/Plus
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
|||| |||||||||| | ||||||| ||| || | | ||| || || || ||||| |
Sbjct 496 AATCGGTTCCTTCGAAAAGTGAATCAATTTCTATGCTGGCTTGCGTAGATGATGATAGCG 555
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--T 517968
||| || || | |||||| || || | | | || | || ||| ||| | |
Sbjct 556 TACGCTTTGCTCTTTCACAGGCAGTACGCAAACGACGCAGAGCAC--GCTTGTTGGTGGT 613
Query 517969 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028
|| ||| |||| | ||| | |||||| || | || | || || ||||| |||||
Sbjct 614 CAGATCCTTTTTGTGTTTGCGCTTGAACTCCTGCACGAAGTGGGTAACTAGACGGTTATC 673
Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088
||||||||||| ||||| | ||||| || | |||| | |||| ||||| ||||||
Sbjct 674 GAAATCTTCACCGCCCAAGTGAGTATCACCAGCAGTAGACTTGACTTCGAAAATTCCATC 733
Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148
|||| |||| || || |||||| ||| || || |||| ||| ||||| || || ||
Sbjct 734 ATCAATTGACAGAATAGACACATCAAAGGTACCGCCGCCCAAATCGAAAATGAGAACGTT 793
Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208
||| | || || || | ||| || |||| ||| || || || || || ||
Sbjct 794 GCGTTCACCCACAGCCTTCTTGTCCAAACCGTAAGCAATAGCGGCTGCTGTGGGCTCGTT 853
Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268
|||||| | ||| ||||| | |||||||| | || ||||| || || ||||| | ||
Sbjct 854 AATAATACGCAATACATTCAATCCAGCAATAGTACCGGCATCCTTGGTAGCTTGACGCTG 913
Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATA 518328
||||| || ||||| || |||||||| || || |||| | || || || | ||
Sbjct 914 AGAATCATTGAAATAAGCTGGAACAGTGATGACAGCATTCGAAACAGTCTTGCCGAGGTA 973
Query 518329 AGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATA 518388
||| ||| || | ||||||||| | | | ||| || || || | || ||| | |
Sbjct 974 AGCTTCTGCGGTCTCCTTCATTTTAGTGAGGACCATGGAAGAGATCTCCTCCGGGAAGAA 1033
Query 518389 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448
||| |||| | ||| ||||| || | |||||| ||||| ||| ||
Sbjct 1034 AGTCTTTTTCTCATCCTTATAGATTACTTGAATTTTTGGTTTTCCTTCAACACTAACTAC 1093
Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCA 518506
|| ||| ||||||| ||||| ||||| || |||| || || | || | | ||||
Sbjct 1094 TTCAAAGGGCCAGTGCTTCATGTCTGACTG--CACTGGGGCATCCTCGAATTTGCGACCA 1151
Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566
|| || ||||| |||||||| ||||| ||||||||||| || ||| | |||| || ||
Sbjct 1152 ATCAAACGTTTGGCATCAAAGATAGTGTTGGTTGGATTCATAGCAACCTGATTCTTAGCG 1211
Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626
||||| ||||| ||| | || || ||||| || | ||||| ||||| || || |||||
Sbjct 1212 GCATCACCAATAAGACGCTCGGTATCTGTGAAGGCGACATAAGATGGTGTGGTACGATTT 1271
Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686
|||||||| || ||||| ||||||||||| |||| ||| |||| |||||||| ||
Sbjct 1272 CCTTGATCGTTGGCAATGATTTCAACTTTGCCATGTTGGAATACTCCTACACACGAGTAA 1331
Query 518687 GTTGTTCCTAAATCAATACCAATAGC 518712
|| || || ||||||||||||| |||
Sbjct 1332 GTAGTACCCAAATCAATACCAACAGC 1357
>seq119161
Length=1594
Score = 131 bits (144), Expect = 1e-24
Identities = 281/420 (67%), Gaps = 0/420 (0%)
Strand=Plus/Plus
Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273
|| || || ||||| || || ||||| ||||| | || ||||| ||||| | |
Sbjct 965 TTTGTGATGGTAATCTTATTTTCCTTGTTGGTTGACCTTTCTAGAGCAGTTACATTCAAA 1024
Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333
||||| |||||||| | |||||| || || |||||||||||||| || | |||| ||
Sbjct 1025 ATACCGTTGGCATCAATATCAAAAGTAACCTCAATTTGAGGGACACCGCGAGGAGCTGGA 1084
Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393
|| || || | | ||| | |||| || || || ||||| | ||||||
Sbjct 1085 GGAATTCCAGAGAGTTCGAATTTGCCCAACAAGTTGTTGTCCTTAGTCATCGCACGTTCA 1144
Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453
|||||| | | |||||| || ||| ||| || |||||||| || || ||| | |
Sbjct 1145 CCCTCGTAGACTTGGATCAACACACCAGGTTGGTTGTCTGAATAGGTGGTGAATGTTTGG 1204
Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513
| || || ||||| || || || | | || | | | |||| | ||| || ||
Sbjct 1205 GTTTGCTTTGTTGGAATGGTGGTATTACGTTTGATCAAAACGCTCATCACACCGCCGGCA 1264
Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573
||||| | ||| | ||| | ||||||||||||| || | || || || | || |
Sbjct 1265 GTTTCAATACCCAAAGACAATGGAGTGACATCAAGAAGCAAAAGATCCTGGACTTCCTGG 1324
Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633
| | ||| | ||| || ||||| | |||||||||||| |||||||||||||||
Sbjct 1325 GACTTGTCACCGTGCAAAATGGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCATCA 1384
>seq52615
Length=2943
Score = 122 bits (134), Expect = 7e-22
Identities = 208/300 (69%), Gaps = 4/300 (1%)
Strand=Plus/Plus
Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079
||| | ||| ||||||||||| ||||| | |||| || || || |||| ||
Sbjct 2644 ACGTTGATCGAAATCTTCACCGCCCAAATGTGTATCGCCATTGGTTGCAACGACTTCAAA 2703
Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139
| ||| | |||| | |||||| | || || ||| ||||| |||| ||| || |
Sbjct 2704 CACTCCGTTATCAATTGTCAAAAGTGACACGTCGAAGGTGCCACCGCCCAAATCGAAGAC 2763
Query 518140 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199
| || ||| |||| || | | || || | ||| || |||| || || |||||
Sbjct 2764 CAACACGTTCTTTTCACCCTCCT---TCTTGTCCAAACCGTATGCAATGGCGGCTGCAGT 2820
Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259
|| |||||||||||||||| || || | ||||||||| ||||||||||| || ||
Sbjct 2821 GGGCTCATTAATAATTCTCATCACGTTCAAACCAGCAATAACGCCTGCATCTTTGGTAGC 2880
Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTT 518318
||| | || | |||||| ||||| || || ||||||| ||||||| || | ||||||
Sbjct 2881 TTGACGCTGAGCATCGTTGAAATAGGCCGGTACAGTAACGACGGCATGTGTAACCTTCTT 2940
>seq46338
Length=2048
Score = 113 bits (124), Expect = 3e-19
Identities = 116/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
||||| |||||||||||| | || |||||||||||||||||||||||| | || || |||
Sbjct 754 GGTAAGGAAGGTCGTATTCGTGGTAATTTGATGGGAAAACGTGTCGATTTCTCGGCTCGT 813
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974
|| || || ||| | ||||||||| | | | || ||||||| ||||| | | |||
Sbjct 814 ACTGTCATCACTCCAGATCCCAATCTACGTATTGATCAAGTTGGCGTTCCACGTTCGATT 873
Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006
|| | |||||||| ||| ||| | |||||
Sbjct 874 GCACAGAATCTTACCTTTCCCGAGCTGGTAAC 905
>seq2084
Length=1588
Score = 95.1 bits (104), Expect = 9e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059
|| |||||||| ||||||||||||||| ||||||| ||||| || | ||| | |||||
Sbjct 1538 GCTACAATAGCCTTTGGTATGGGTATTGATAAACCCGATGTAAGGTTCGTTTTGCATTAC 1479
Query 367060 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 367119
| ||||||| ||| || || |||||||||||| ||| | || ||||| |||||
Sbjct 1478 TCATTACCCAAGAGTATCGAGGGCTATTATCAAGAAGCCGGTCGTGCTGGTCGCGATGGT 1419
Query 367120 GA 367121
||
Sbjct 1418 GA 1417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3773567672910376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |