Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq146010 100 3e-16 >seq146010 Length=1781 Score = 100 bits (110), Expect = 3e-16 Identities = 665/1048 (63%), Gaps = 49/1048 (5%) Strand=Plus/Plus Query 39764 TCATGGATTCCGATGTACCCTAACGAAATTGAAGAACGACCATTTCGGAAGATGTCGAGA 39823 ||||| ||||| ||||| || | || ||||||| || |||||| ||| || || ||| Sbjct 187 TCATGTATTCCAATGTAGCCAAGAGAGATTGAAGCTCGTCCATTTTTGAATATTTC-AGA 245 Query 39824 -ATCTCATCGTTTGGCTTAAGACGAACACCAAAAGCACCTTCTTGGTAAAGAATAGGAGC 39882 || ||||| | || | |||||| ||| |||| ||||| || | ||||| || Sbjct 246 TATACTATCGTCTTCTTTTAAACGAACGCCACAAGCGCCTTCCATATATAAGATAGGGGC 305 Query 39883 TACCGAAGCTGTTACACCA-CGAAGCGATTCAATACGAGCTAAAAGAGCTTCTTTACAAA 39941 || |||| | |||||| | || ||| | |||||| | | |||| |||||| | Sbjct 306 AACACGAGCTTTAACACCATCTAAACGAG-CGATACGATTCATTAATGCTTTTTTACATA 364 Query 39942 TCTTCAAACGGTCATC-AAGAATATGGAAGAACTTGGTCAAATCTGGACGACCATCAACC 40000 | || |||| ||| || ||| || || ||| | |||| |||| | Sbjct 365 AAATTAAGCGGTTATCCAATAATTCCCAA-AATTTGCTTTCATCT------CCATGGGC- 416 Query 40001 ATACAATCGAGTGCTACTCGTGGAAGGTTAATTGTCACTACGCCAAGATTATTACGTCCG 40060 | |||| ||| | ||| || | ||| | | | || || | |||||| |||||| Sbjct 417 -TTCAAT----TGCAATTCGCGGTAAGTTTAAACTTATGACACCTAAATTATTTCGTCCG 471 Query 40061 TCAAGAATTTCTTCACCGTCTTTGTTCTTCCATACGCCAAGGAATGAACGACATCCCATT 40120 ||| ||| || | || |||| | | |||||||||| || ||| ||||||||| Sbjct 472 TCATGAACTTGCTTGCCATCTTCCTCAT---ATACGCCAAGAAAGCTACGGCATCCCATT 528 Query 40121 GGAGAAACTGGAACAGAAGAACCAGTGATTA-GACGGTTATTCTTTGAACTAATGATGTC 40179 || | | ||| ||||| || | ||| | || | || | | || || Sbjct 529 GGCGTT--TTGAAT----GAACCCGTTACCGCGACCACT-TTATCGTAATTTAAAATATC 581 Query 40180 AGGATACATTCGTTTACTTGCACATTCCAATGCAAGTTGTTTGATGTCATAATTCACATC 40239 || ||||| || |||||||||||||| ||||| |||| |||||| |||||||| | ||| Sbjct 582 GGGGTACATACGCTTACTTGCACATTCTAATGCGAGTTTTTTGATATCATAATTGATATC 641 Query 40240 AGTTGGATGAAGGTTAATTCCTTCTTCAA---CAAACATAACGAGCTTAGGAAAAATTGG 40296 | | | | |||| || |||| | |||||| | | || ||||||| || Sbjct 642 ACCAACCTTATGATTAACGCCATCTTTTATTGCAAACA---CCAATTTTGGAAAAACTGC 698 Query 40297 AGTGATTCCGTCTCGTCCAAGGCCTTTGATTC-TATTTTTGAGAATAGCTTTTTGAATCA 40355 || | || ||| | ||||| | | ||||||| | ||||| || ||| || | Sbjct 699 TGTTTTGTGGTTCTTTCCTAATCCTTTTAAACGTATTTTTAA-AATAGATTCTTGGATGA 757 Query 40356 TACGT---TCATAATCGCTTGTGCCAGTACCAAAGGTAATTGTCACGAATGGAGTTTGAC 40412 ||| || || ||| | || |||||| || ||| || ||||| ||||||| Sbjct 758 GTCGTGATTCCCAA---CTTTTACCTAATCCAAAGCCAAATGTAACAAATGGCGTTTGAC 814 Query 40413 CATTTGAGCTGAACAGAGTATTGACTTCATATTCATAAGCCTGGAATGCATCATATACGT 40472 |||| | | || || || || ||||| || ||| || |||||||||||||| | Sbjct 815 CATTAGCGGTGTGGAGTGTGTTCACTTCGTACTCAAGAGATTGGAATGCATCATAACACT 874 Query 40473 CTTTTTCTGTTTTCTCAATCGCGTATACGTAGTCATTGACGTGCTCAATACCGTATCTTT 40532 ||||||| || | | || || || |||| || | | | || ||| | Sbjct 875 CTTTTTCAGTGCGATTTTTTGCATA---GTGGTCAG-GATTTTTTATTTGCCAC-TCTGT 929 Query 40533 CTGCATCACGTAAATGCTTAAAGAAAGTCTTCTCTACAAAAGGAGCAAGCACAACATCAA 40592 | || | | ||| || || | | ||||| || | | |||| | Sbjct 930 C-GCGACTTGCTTATGTTTTTGATAACTGATACTAACAAATTTTGCTAATATCTCATCGA 988 Query 40593 CATTAGCAAATGTCGTTCCACCGTATTGATGAGAAGCTACTTGAGCAGTGATTTGAGCCA 40652 | | || ||||||||||||||| ||| || || |||||| | ||||||||| Sbjct 989 TACGATTAATTGTCGTTCCACCGTAAATATGGCTTGCCACCTGAGCAATAATTTGAGCCG 1048 Query 40653 TGATAGCAGTTGCTACACCAATTGACTTTGGAGTCTCAATTTGAGCATTACCAAGTTTAA 40712 ||| || ||||| |||| || || || | ||||||| || || || | ||||| Sbjct 1049 TGACCGCGGTTGCCGTTGCAATAGATTTAGGCGGTTCAATTTCGGCGTTGCCCATTTTAA 1108 Query 40713 ATCCATTGCTGAGCATACCCTTCAAATCGACTAAGCAACAGTTAGTGAATGGAAGAGCTG 40772 | || ||| | ||||| || | | ||||| ||| || ||| | ||||| | || Sbjct 1109 AACCGTTGGTAAGCATGCCATCTAGATCGATTAACATGCAATTAAACATTGGAAAAAATG 1168 Query 40773 GAGAATAGTCTAAGTCGTGAAAATGAAT 40800 | | ||| || || || ||| ||||||| Sbjct 1169 GTGCATAATCCAAATCATGATAATGAAT 1196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 528632182480000