Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq25219 127 2e-24 >seq25219 Length=1370 Score = 127 bits (140), Expect = 2e-24 Identities = 278/414 (67%), Gaps = 2/414 (0%) Strand=Plus/Minus Query 18796 TCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTAACA 18855 || |||||||||| ||||||| ||| | || || |||||||| || | || || Sbjct 558 TCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAGTTCATTCCGATAAGATTGACG 499 Query 18856 GGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGATACA 18915 || || || ||||| | |||||||| || || || ||||| || | || || || Sbjct 498 GGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACTGCTTCAGCGATGATGTCTATG 439 Query 18916 ACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATCACAA 18975 | | || | | || | | | ||| || ||||||| ||| || || || ||| Sbjct 438 ATGCGTTCCTTGCTTGGTTTCTGCACCAAATGCTTGAACATCAGACAAGCGAAGTCGCAA 379 Query 18976 TGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCT 19035 || ||||||||||| | |||| || || || ||||| | ||| ||||| || || Sbjct 378 TGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGACCGGGCATGAGACCG 319 Query 19036 CttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCT 19095 | || || | |||||| || || || || || ||||| || ||||| ||||| Sbjct 318 CGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTGAAGAAAATCCCTTCAACTGCA 259 Query 19096 GCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA-ATCCATTTCAGTGC 19154 ||||| |||| | | ||| || | | || || | ||| |||||| ||||| Sbjct 258 GCAAATGCAATGATACGTTCACCGAAGTTTGCGGACTTGCT-TGAGATCCATGCAAGTGC 200 Query 19155 CCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 ||| ||||||||||| || |||||||| | ||| || || | ||| || ||||| Sbjct 199 CCAGTCAGCCTTCTTCTTCACACATGGGAGTGTTTCAATTGCATTGAAAAGATA 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561081574273440