Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq336 255 5e-62 seq119161 105 5e-17 seq145784 95.1 1e-13 seq78749 89.7 4e-12 seq52615 87.8 1e-11 >seq336 Length=4635 Score = 255 bits (282), Expect = 5e-62 Identities = 383/539 (71%), Gaps = 4/539 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| ||||| || || || || ||||| || || | ||| |||| || Sbjct 1358 AGCTGTTGGTATTGATTTGGGTACTACTTACTCGTGTGTAGGAGTATTCCAACATGGCAA 1299 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||| |||||||| |||||||| || | || || ||||||||||| | ||||| Sbjct 1298 AGTTGAAATCATTGCCAACGATCAAGGAAATCGTACCACACCATCTTATGTCGCCTTCAC 1239 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | | | |||||||||| || || |||| | || ||||| ||||| Sbjct 1238 AGATACCGAGCGTCTTATTGGTGATGCCGCTAAGAATCAGGTTGCTATGAATCCAACCAA 1179 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||||| |||||||| |||||||| ||||| | | || | ||| | | || ||| | Sbjct 1178 CACTATCTTTGATGCCAAACGTTTGATTGGTCGCAAATTCGAGGATGCCCCAGTGCAGTC 1119 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||| |||||||| ||||| || || | |||| |||| |||||||| | ||| ||| Sbjct 1118 AGACATGAAGCACTGGCCCTTTGAAGTAGTTAGTGTTGAAGGAAAACCAAAAATTCAAG- 1060 Query 550291 TACTCATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTTTAA 550349 || || |||||| | ||| | ||| | || || | || || || ||||| | | Sbjct 1059 TAATCTATAAGGATGAGAAAAAGACTTTCTTCCCGGAGGAGATCTCTTCCATGGTCCTCA 1000 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATA 550408 |||||||| | || || |||| | || ||||| ||| || |||| || || Sbjct 999 CTAAAATGAAGGAGACCGCAGAAGCTTACCTCGG-CAAGACTGTTTCGAATGCTGTCATC 941 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| ||||| ||||| ||||| || || ||||||||||| || ||||| || |||| Sbjct 940 ACTGTTCCAGCTTATTTCAATGATTCTCAGCGTCAAGCTACCAAGGATGCCGGTACTATT 881 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| | ||||| | |||||||| || || || || || || || |||| || || Sbjct 880 GCTGGATTGAATGTATTGCGTATTATTAACGAGCCCACAGCAGCCGCTATTGCTTACGG 822 >seq119161 Length=1594 Score = 105 bits (116), Expect = 5e-17 Identities = 277/419 (66%), Gaps = 18/419 (4%) Strand=Plus/Minus Query 552216 GATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG--ACAAA-CT 552272 ||||| |||||||| |||||||| || | ||||| || ||| | || |||| | Sbjct 1383 GATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCCATTTTGCACGGTGACAAGTCC 1324 Query 552273 GATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAA 552332 | ||| | || || || | ||| | ||||| ||||| | ||| | ||| | ||| Sbjct 1323 CAGGAAG---TCCAGGATCTTTTGCTTCTTGATGTCACTCCATTGTCTTTGGGTATTGAA 1267 Query 552333 ACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAA 552392 || | || ||| | |||| | | ||| | | ||||| || ||||| || || Sbjct 1266 ACTGCCGGCGGTGTGATGAGCGTTTTGATCAAACGTAATACCACCATTCCAACAAAGCAA 1207 Query 552393 TCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAA 552452 | | ||| | || |||||||| || ||| ||| ||| || ||| | | || Sbjct 1206 ACCCAAACATTCACCACCTATTCAGACAACCAACCTGGTGTGTTGATCCAAGTCTACGAG 1147 Query 552453 GGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA------ 552506 || ||| | | ||||| || || ||||||| | || || ||| Sbjct 1146 GGTGAACGTGCGATGACTAAGGACAA----CAACTTGTTGGGC--AAATTCGAACTCTCT 1093 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 || |||||||| |||||||| || || || |||||||| |||||||| ||||| |||||| Sbjct 1092 GGAATTCCTCCAGCTCCTCGCGGTGTCCCTCAAATTGAGGTTACTTTTGATATTGATGCC 1033 Query 552567 AATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAAATATTAC 552625 || || ||||||||||| |||||| || | || | ||||||| || || ||||| Sbjct 1032 AACGGTATTTTGAATGTAACTGCTCTAGAAAGGTCAACCAACAAGGAAAATAAGATTAC 974 >seq145784 Length=1430 Score = 95.1 bits (104), Expect = 1e-13 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| | || |||||||| || || || || || |||||||||||||| ||||||| Sbjct 176 ATGCAGTTGTTACAGTACCAGCTTACTTCAACGATTCCCAACGTCAAGCTACCAAAGATG 235 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | ||| | ||| | || ||| | ||| |||| || ||||| || || ||||| Sbjct 236 CTGGTCAAATTTCGGGATTGAACGTTTTGCGTGTTATTAACGAACCCACAGCAGCTGCCT 295 Query 550518 TTGCATATGG 550527 | || ||||| Sbjct 296 TGGCCTATGG 305 >seq78749 Length=5959 Score = 89.7 bits (98), Expect = 4e-12 Identities = 215/321 (67%), Gaps = 12/321 (4%) Strand=Plus/Minus Query 368794 GTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATTT 368853 || || ||||| |||||||||||||| |||||||| | | |||| ||| | ||| ||| Sbjct 2153 GTATTCGATTGTTGGTTTGAATCAGGCTCTATGCCGTTCGCTCAAGCACACTTTCCGTTT 2094 Query 368854 GATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATCA 368913 || |||| ||| | ||| |||| | || || |||||||| | |||| Sbjct 2093 GAAAACGAGAAAGATTTT----ATGA-ATAGCTT-CCCAGCTGATTTCATTGCAGAGGGC 2040 Query 368914 ATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGAT 368973 || |||||||| | || ||||| || || || | || | || || || | ||| || Sbjct 2039 ATCGATCAAACCAGAGGGTGGTTCTACACACTTCTTGTTGTTTCAACGGCCCTGTTCAAT 1980 Query 368974 AAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAAG 369033 || || | || ||||| |||| | || ||| || || || ||||| || ||| Sbjct 1979 AAGCCTCCATTCAAAAACTTAATCGCAAATGGACTTATTTTGGCGAGCGATGGACAGAAG 1920 Query 369034 ATGTCAAAAAGTAAGGGTAATTATTCCGATCCTA---ATATTTTAATTGATAAATTTGGT 369090 ||||| ||| | ||| ||||| | ||||||| ||||| | | |||| || Sbjct 1919 ATGTCCAAACGAAAGAAGAATTACCCTGATCCTATGGATATT---GTCCACAAATACGGG 1863 Query 369091 GCTGATACTTTGAGATTATAC 369111 |||||| | ||||| ||||| Sbjct 1862 GCTGATGCCTTGAGGCTATAC 1842 >seq52615 Length=2943 Score = 87.8 bits (96), Expect = 1e-11 Identities = 106/143 (74%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 550386 AAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444 |||||| |||| |||| || | |||||||| || ||||| || || | || |||||| Sbjct 2940 AAGAAGGTTACACATGCCGTCGTTACTGTACCGGCCTATTTCAACGATGCTCAGCGTCAA 2881 Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504 ||||| |||||||| || ||||||||| | || || | | ||||| ||||| || Sbjct 2880 GCTACCAAAGATGCAGGCGTTATTGCTGGTTTGAACGTGATGAGAATTATTAATGAGCCC 2821 Query 550505 ACTGCTGCTGCACTTGCATATGG 550527 ||||| || || ||||||| || Sbjct 2820 ACTGCAGCCGCCATTGCATACGG 2798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4021564496176040