Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq145875 203 6e-47 seq145812 84.2 4e-11 >seq145875 Length=1531 Score = 203 bits (224), Expect = 6e-47 Identities = 305/426 (72%), Gaps = 8/426 (2%) Strand=Plus/Minus Query 208500 GCACGTTTCTTGATATGTTCGTTATCT---ACAACGTCATCAAAGACAATGGAAGGATCG 208556 |||||||| |||| || |||| ||| | |||| |||||||||||||| || ||||| Sbjct 1424 GCACGTTT-TTGA-AT-TTCGGTATTTGTCACAATATCATCAAAGACAATCGATGGATCA 1368 Query 208557 TTAACGATGTTCCTGATGATGTGAGTATAGCTACGACTGTGGATGGTTTCAGAGAAGCCC 208616 || |||||||| | || || || ||||| || |||||| ||||| || || | Sbjct 1367 TTGACGATGTTACGAATAATATGGGTATAAGATCGCGAGTGGATAGTTTCTGAAAATGAC 1308 Query 208617 CAGGTCTCAGCCCATGTTTCCAGCTCTGGGATAGAGCAGATCGGGAGTAATGCAACGTTT 208676 || || ||| |||| ||||| ||||| || || || | ||||| ||||| || || Sbjct 1307 CACGTTTCAACCCAAGTTTCAAGCTCAGGTATTGAAATTAAAGGGAGCAATGCGACATTC 1248 Query 208677 GGACCACGGCCCTGGATAGAGTCCAGTAGTGTCTGATATTTCAGGTTACTGATGAACAGG 208736 |||| || || || || || ||||||| || |||||||| | ||||||||| || | Sbjct 1247 GGACTGCGTCCTTGAATCGAATCCAGTAAAGTTTGATATTTTAAGTTACTGATAAAAATA 1188 Query 208737 TGTTTCTCGTGATCTGGTAAAGCCA-TGTAGTCAATACGGTCACGGGAGACATCTACTTC 208795 ||||| || || || || || ||| || || || || || | || | ||| ||||| Sbjct 1187 TGTTTTTCATGTTCAGG-AAGTCCAGCATAATCGATTCGATCTTGTGAAATATCCACTTC 1129 Query 208796 TTCAGGACGCCAGAAGAAAGAAAGTTGTTTCTCAATGAGTTTCTCAAAGATCTCATACTT 208855 ||| || ||||| || ||||| | || || ||||| ||||| ||||| || ||||| || Sbjct 1128 TTCTGGCCGCCAAAAAAAAGATAACTGCTTTTCAATTAGTTTTTCAAAAATTTCATATTT 1069 Query 208856 CTGTTGGTCGTAACGAGAAACGTTGACGTTTTGACCCAGGAACATGTGTTCTTGTAATTG 208915 ||||| || ||||| | ||| || || ||| || || ||||| |||||| | ||| Sbjct 1068 TTGTTGATCATAACGCGCAACATTAACCGATTGTCCAAGAAACATCGGTTCTTTCAGTTG 1009 Query 208916 ATCGTT 208921 || || Sbjct 1008 GTCATT 1003 >seq145812 Length=1452 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 16120 ATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTATC 16179 |||| | ||||||||||||||||||||||||| | ||||||||||| ||||||||| Sbjct 1 ATGGTGTCCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATC 60 Query 16180 CA-CTGAGCTAAG 16191 || |||||||||| Sbjct 61 CAGCTGAGCTAAG 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 909429420538720