Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq145976 120 1e-22 >seq145976 Length=1681 Score = 120 bits (132), Expect = 1e-22 Identities = 222/325 (68%), Gaps = 3/325 (1%) Strand=Plus/Plus Query 25963 CCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAACGCCG---TCCTTTTCCCAC 26019 ||| ||| ||| ||||| || || || ||||||| ||| || | | || ||| Sbjct 608 CCGACAATGTTAACCACGATCTCGGTAATGTAGCGATCATTACCTGTTTGATCTTGCCAT 667 Query 26020 TTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCC 26079 ||||| |||| | ||||| ||||| ||||| || |||||||| || | ||| || || Sbjct 668 TTGCGAGTTTGTAACTGCCCTTCAATATAAACTTGAGAACCTTTTTTTAAGTATTCACCA 727 Query 26080 GCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGTCACTTCTTTCTTT 26139 || || || |||| || ||||| | || | ||||||||||| || || | || Sbjct 728 GCAATTTCTGCTAATTTACCAAAAACGACAATTCGATGCCATTCGGTTCGGTCGCGCATT 787 Query 26140 TCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGACTGCG 26199 || || || ||||| ||||| ||| ||||| || | | ||| || || || ||| Sbjct 788 TCATTTGTTTGTTTATCCTTCCATGATTCAGAGGTAGCGATGCTAAAATTTGCAACCGCG 847 Query 26200 CCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACT 26259 | ||||| || | ||||| | || ||||| | || | ||| || || | || ||| Sbjct 848 CTTCCATTTGGTAGATAACGAACTTCAGGATCTTGGCCTAAGTTTCCAACTAAAATAACT 907 Query 26260 TTATTTACGCCGCGTGATGCCATTA 26284 ||||||| || || | |||||||| Sbjct 908 TTATTTATTCCTCGAGTTGCCATTA 932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159540144260536